RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 HDHD3Q9BSH5 251 aaPredicted RBP9.65□□□□□ -0.86
CPNE1-221ENST00000462352 ABCG5Q9H222 651 aa9.65□□□□□ -0.86
CPNE1-221ENST00000462352 ZMAT3Q9HA38 289 aaKnown RBP9.65□□□□□ -0.86
CPNE1-221ENST00000462352 CALYQ9NYX4 217 aa9.65□□□□□ -0.86
CPNE1-221ENST00000462352 RSL24D1Q9UHA3 163 aaKnown RBP9.65□□□□□ -0.86
CPNE1-221ENST00000462352 NUP50Q9UKX7 468 aa9.65□□□□□ -0.86
CPNE1-221ENST00000462352 TRAPPC2LQ9UL33 140 aa9.65□□□□□ -0.86
CPNE1-221ENST00000462352 NAV3Q8IVL0 2385 aa9.65□□□□□ -0.87
CPNE1-221ENST00000462352 SMIM31A0A1B0GVY4 71 aa9.64□□□□□ -0.87
CPNE1-221ENST00000462352 ZNF701M0R085 212 aaPredicted RBP9.64□□□□□ -0.87
CPNE1-221ENST00000462352 NAPSAO96009 420 aa9.64□□□□□ -0.87
CPNE1-221ENST00000462352 RCC1P18754 421 aaPredicted RBP9.64□□□□□ -0.87
CPNE1-221ENST00000462352 GZMHP20718 246 aa9.64□□□□□ -0.87
CPNE1-221ENST00000462352 SSTR5P35346 364 aa9.64□□□□□ -0.87
CPNE1-221ENST00000462352 GDNFP39905 211 aa9.64□□□□□ -0.87
CPNE1-221ENST00000462352 ARL6IP1Q15041 203 aa9.64□□□□□ -0.87
CPNE1-221ENST00000462352 CDNFQ49AH0 187 aa9.64□□□□□ -0.87
CPNE1-221ENST00000462352 GPR157Q5UAW9 335 aa9.64□□□□□ -0.87
CPNE1-221ENST00000462352 NCR3LG1Q68D85 454 aa9.64□□□□□ -0.87
CPNE1-221ENST00000462352 HCP5Q6MZN7 132 aa9.64□□□□□ -0.87
CPNE1-221ENST00000462352 MZT2AQ6P582 158 aa9.64□□□□□ -0.87
CPNE1-221ENST00000462352 BRD3OSQ6XYD6 125 aa9.64□□□□□ -0.87
CPNE1-221ENST00000462352 RFESDQ8TAC1 157 aa9.64□□□□□ -0.87
CPNE1-221ENST00000462352 CMSS1Q9BQ75 279 aaKnown RBP9.64□□□□□ -0.87
CPNE1-221ENST00000462352 RIMS4Q9H426 269 aaPredicted RBP9.64□□□□□ -0.87
CPNE1-221ENST00000462352 HEXA-AS1Q9H8Q6 139 aa9.64□□□□□ -0.87
CPNE1-221ENST00000462352 LINC00574Q9H8X3 128 aa9.64□□□□□ -0.87
CPNE1-221ENST00000462352 CHMP1AQ9HD42 196 aaPredicted RBP9.64□□□□□ -0.87
CPNE1-221ENST00000462352 MBNL3Q9NUK0 354 aaKnown RBP9.64□□□□□ -0.87
CPNE1-221ENST00000462352 CCDC59Q9P031 241 aaKnown RBP9.64□□□□□ -0.87
CPNE1-221ENST00000462352 SESN1Q9Y6P5 492 aa9.64□□□□□ -0.87
CPNE1-221ENST00000462352 KIAA2026Q5HYC2 2103 aa9.64□□□□□ -0.87
CPNE1-221ENST00000462352 NIPBLQ6KC79 2804 aaeCLIP9.63□□□□□ -0.87
CPNE1-221ENST00000462352 MXRA5Q9NR99 2828 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 SETD2Q9BYW2 2564 aaPredicted RBP9.63□□□□□ -0.87
CPNE1-221ENST00000462352 TRBV6-6A0A0A6YYG2 114 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 A0A0A6YYH2 397 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 IGHV1-69DA0A0B4J2H0 117 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 DPPA5A6NC42 116 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 A6NJ64 397 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 SERPINE3A8MV23 424 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 C12orf77C9JDV5 145 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 NPIPB11E5RHQ5 1161 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 C15orf65H3BRN8 121 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 ORC5O43913 435 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 IGHV1-69P01742 117 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 EIF4EP06730 217 aaKnown RBP9.63□□□□□ -0.87
CPNE1-221ENST00000462352 CD3GP09693 182 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 FAM157CP0CG43 387 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 EPHA1P21709 976 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 COX7A1P24310 79 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 UBE2E1P51965 193 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 GUCA2AQ02747 115 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 ZNF260Q3ZCT1 412 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 C6orf183Q5T699 404 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 RUSC1-AS1Q66K80 236 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 ZNF880Q6PDB4 577 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 TRAT1Q6PIZ9 186 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 BAIAP2L2Q6UXY1 529 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 Q6ZPA2 131 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 OR13D1Q8NGV5 346 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 UBALD1Q8TB05 177 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 SETD6Q8TBK2 473 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 C22orf15Q8WYQ4 148 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 ARL11Q969Q4 196 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 S100A16Q96FQ6 103 aaKnown RBP9.63□□□□□ -0.87
CPNE1-221ENST00000462352 KIRREL1Q96J84 757 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 CMTM3Q96MX0 182 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 TMEM133Q9H2Q1 129 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 C12orf4Q9NQ89 552 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.63□□□□□ -0.87
CPNE1-221ENST00000462352 DIABLOQ9NR28 239 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 IDI2-AS1Q9NZ38 188 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 NDUFA13Q9P0J0 144 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 ZNF69Q9UC07 566 aa9.63□□□□□ -0.87
CPNE1-221ENST00000462352 ELF5Q9UKW6 265 aaPredicted RBP9.63□□□□□ -0.87
CPNE1-221ENST00000462352 TRAV18A0A075B6X5 111 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 A0A1W2PRD5 423 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 A0A1W2PRF3 423 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 A0A1W2PRM7 423 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 TMEM235A6NFC5 223 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 HPGDSO60760 199 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 APOA1P02647 267 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 GSTP1P09211 210 aaKnown RBP9.62□□□□□ -0.87
CPNE1-221ENST00000462352 BPIFB3P59826 476 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 MRPS15P82914 257 aaKnown RBP9.62□□□□□ -0.87
CPNE1-221ENST00000462352 ARFRP1Q13795 201 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 LTC4SQ16873 150 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 HACD4Q5VWC8 232 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 OR52W1Q6IF63 320 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 C9orf139Q6ZV77 190 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 MOB1BQ7L9L4 216 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 C5orf24Q7Z6I8 188 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 ZNF554Q86TJ5 538 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 IZUMO1Q8IYV9 350 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 PNKDQ8N490 385 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 PRR18Q8N4B5 295 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 DTX3Q8N9I9 347 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 OR10A7Q8NGE5 316 aa9.62□□□□□ -0.87
CPNE1-221ENST00000462352 DCUN1D5Q9BTE7 237 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms