RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 GNG10P50151 68 aa15.09■□□□□ 0.01
VARS-220ENST00000461874 GPR176Q14439 515 aa15.09■□□□□ 0.01
VARS-220ENST00000461874 ATAD3CQ5T2N8 411 aa15.09■□□□□ 0.01
VARS-220ENST00000461874 OGFRL1Q5TC84 451 aaPredicted RBP15.09■□□□□ 0.01
VARS-220ENST00000461874 OR14A2Q96R54 314 aa15.09■□□□□ 0.01
VARS-220ENST00000461874 PLCXD1Q9NUJ7 323 aa15.09■□□□□ 0.01
VARS-220ENST00000461874 PNMA8CA0A1B0GUJ8 204 aa15.08■□□□□ 0
VARS-220ENST00000461874 A0A1W2PPI3 338 aa15.08■□□□□ 0
VARS-220ENST00000461874 A0A1W2PPK0 400 aa15.08■□□□□ 0
VARS-220ENST00000461874 CASQ2O14958 399 aaPredicted RBP15.08■□□□□ 0
VARS-220ENST00000461874 CD1AP06126 327 aa15.08■□□□□ 0
VARS-220ENST00000461874 SNRNP70P08621 437 aaKnown RBP15.08■□□□□ 0
VARS-220ENST00000461874 DIAPH2-AS1Q14236 149 aa15.08■□□□□ 0
VARS-220ENST00000461874 TCTEX1D4Q5JR98 221 aa15.08■□□□□ 0
VARS-220ENST00000461874 DRAM1Q8N682 238 aa15.08■□□□□ 0
VARS-220ENST00000461874 OR56B4Q8NH76 319 aa15.08■□□□□ 0
VARS-220ENST00000461874 MUL1Q969V5 352 aa15.08■□□□□ 0
VARS-220ENST00000461874 MRPS28Q9Y2Q9 187 aaKnown RBP15.08■□□□□ 0
VARS-220ENST00000461874 MOB4Q9Y3A3 225 aa15.08■□□□□ 0
VARS-220ENST00000461874 C15orf65H3BRN8 121 aa15.07■□□□□ 0
VARS-220ENST00000461874 MT-ND4P03905 459 aa15.07■□□□□ 0
VARS-220ENST00000461874 RAB7AP51149 207 aa15.07■□□□□ 0
VARS-220ENST00000461874 WNT4P56705 351 aa15.07■□□□□ 0
VARS-220ENST00000461874 DOC2BQ14184 412 aa15.07■□□□□ 0
VARS-220ENST00000461874 GLIPR1L1Q6UWM5 242 aa15.07■□□□□ 0
VARS-220ENST00000461874 ZNF497Q6ZNH5 498 aa15.07■□□□□ 0
VARS-220ENST00000461874 AHSA2Q719I0 299 aa15.07■□□□□ 0
VARS-220ENST00000461874 CDH26Q8IXH8 852 aa15.07■□□□□ 0
VARS-220ENST00000461874 OR8H3Q8N146 312 aa15.07■□□□□ 0
VARS-220ENST00000461874 STX19Q8N4C7 294 aa15.07■□□□□ 0
VARS-220ENST00000461874 JAGN1Q8N5M9 183 aa15.07■□□□□ 0
VARS-220ENST00000461874 BPIFB6Q8NFQ5 453 aa15.07■□□□□ 0
VARS-220ENST00000461874 OR52M1Q8NGK5 317 aa15.07■□□□□ 0
VARS-220ENST00000461874 OR10X1Q8NGY0 326 aa15.07■□□□□ 0
VARS-220ENST00000461874 ARL11Q969Q4 196 aa15.07■□□□□ 0
VARS-220ENST00000461874 DERL3Q96Q80 235 aa15.07■□□□□ 0
VARS-220ENST00000461874 SPACA1Q9HBV2 294 aa15.07■□□□□ 0
VARS-220ENST00000461874 A0A1W2PPE3 182 aa15.06■□□□□ 0
VARS-220ENST00000461874 A0A1W2PRX2 142 aa15.06■□□□□ 0
VARS-220ENST00000461874 MYL12BO14950 172 aa15.06■□□□□ 0
VARS-220ENST00000461874 PIN1P1O15428 100 aa15.06■□□□□ 0
VARS-220ENST00000461874 ORC5O43913 435 aa15.06■□□□□ 0
VARS-220ENST00000461874 CELP19835 753 aa15.06■□□□□ 0
VARS-220ENST00000461874 C9orf152Q5JTZ5 239 aa15.06■□□□□ 0
VARS-220ENST00000461874 LYPD6Q86Y78 171 aa15.06■□□□□ 0
VARS-220ENST00000461874 NEK7Q8TDX7 302 aa15.06■□□□□ 0
VARS-220ENST00000461874 CCDC107Q8WV48 283 aa15.06■□□□□ 0
VARS-220ENST00000461874 MRPS24Q96EL2 167 aaKnown RBP15.06■□□□□ 0
VARS-220ENST00000461874 FKBP14Q9NWM8 211 aa15.06■□□□□ 0
VARS-220ENST00000461874 RCC2Q9P258 522 aaKnown RBP15.06■□□□□ 0
VARS-220ENST00000461874 TCRBV4S1A1TA0A5B7 111 aa15.05■□□□□ -0
VARS-220ENST00000461874 MAS1P04201 325 aa15.05■□□□□ -0
VARS-220ENST00000461874 LOXL3P58215 753 aa15.05■□□□□ -0
VARS-220ENST00000461874 HES1Q14469 280 aa15.05■□□□□ -0
VARS-220ENST00000461874 OXLD1Q5BKU9 147 aa15.05■□□□□ -0
VARS-220ENST00000461874 NANOGP1Q8N7R0 232 aa15.05■□□□□ -0
VARS-220ENST00000461874 OR4X2Q8NGF9 303 aa15.05■□□□□ -0
VARS-220ENST00000461874 UBALD1Q8TB05 177 aa15.05■□□□□ -0
VARS-220ENST00000461874 TFAP2CQ92754 450 aa15.05■□□□□ -0
VARS-220ENST00000461874 MYDGFQ969H8 173 aa15.05■□□□□ -0
VARS-220ENST00000461874 GFOD1Q9NXC2 390 aa15.05■□□□□ -0
VARS-220ENST00000461874 TSSC4Q9Y5U2 329 aaPredicted RBP15.05■□□□□ -0
VARS-220ENST00000461874 MCRIP1C9JLW8 97 aa15.04■□□□□ -0
VARS-220ENST00000461874 AIPO00170 330 aa15.04■□□□□ -0
VARS-220ENST00000461874 SDCBPO00560 298 aaPredicted RBP15.04■□□□□ -0
VARS-220ENST00000461874 HSD17B6O14756 317 aa15.04■□□□□ -0
VARS-220ENST00000461874 TMEM11P17152 192 aa15.04■□□□□ -0
VARS-220ENST00000461874 ZNF816Q0VGE8 651 aaPredicted RBP15.04■□□□□ -0
VARS-220ENST00000461874 HNF4GQ14541 408 aa15.04■□□□□ -0
VARS-220ENST00000461874 AWAT2Q6E213 333 aa15.04■□□□□ -0
VARS-220ENST00000461874 C10orf99Q6UWK7 81 aa15.04■□□□□ -0
VARS-220ENST00000461874 LINC00311Q8N616 119 aa15.04■□□□□ -0
VARS-220ENST00000461874 C8orf31Q8N9H6 132 aa15.04■□□□□ -0
VARS-220ENST00000461874 WFDC9Q8NEX5 89 aa15.04■□□□□ -0
VARS-220ENST00000461874 ERGIC3Q9Y282 383 aa15.04■□□□□ -0
VARS-220ENST00000461874 CCRL2O00421 344 aa15.03■□□□□ -0
VARS-220ENST00000461874 FGF16O43320 207 aa15.03■□□□□ -0
VARS-220ENST00000461874 IGKV1D-33P01593 117 aa15.03■□□□□ -0
VARS-220ENST00000461874 IGKV1-33P01594 117 aa15.03■□□□□ -0
VARS-220ENST00000461874 PRB2P02812 416 aaPredicted RBP15.03■□□□□ -0
VARS-220ENST00000461874 GAPDHP04406 335 aaKnown RBP15.03■□□□□ -0
VARS-220ENST00000461874 RAB12Q6IQ22 244 aa15.03■□□□□ -0
VARS-220ENST00000461874 FAM53AQ6NSI3 398 aaPredicted RBP15.03■□□□□ -0
VARS-220ENST00000461874 GAPTQ8N292 157 aa15.03■□□□□ -0
VARS-220ENST00000461874 C5orf56Q8N8D9 126 aa15.03■□□□□ -0
VARS-220ENST00000461874 TMEM104Q8NE00 496 aa15.03■□□□□ -0
VARS-220ENST00000461874 THRSPQ92748 146 aa15.03■□□□□ -0
VARS-220ENST00000461874 SELENOIQ9C0D9 397 aa15.03■□□□□ -0
VARS-220ENST00000461874 VCXQ9H320 206 aa15.03■□□□□ -0
VARS-220ENST00000461874 BANF2Q9H503 90 aa15.03■□□□□ -0
VARS-220ENST00000461874 ETAA1Q9NY74 926 aa15.03■□□□□ -0
VARS-220ENST00000461874 IGHV1-3A0A0C4DH29 117 aa15.02■□□□□ -0
VARS-220ENST00000461874 FAM90A10PA6NDY2 464 aa15.02■□□□□ -0
VARS-220ENST00000461874 FAM90A7PA6NKC0 464 aa15.02■□□□□ -0
VARS-220ENST00000461874 FAM90A23PA8MXZ1 464 aa15.02■□□□□ -0
VARS-220ENST00000461874 C12orf77C9JDV5 145 aa15.02■□□□□ -0
VARS-220ENST00000461874 ANKRD65E5RJM6 399 aa15.02■□□□□ -0
VARS-220ENST00000461874 PF4V1P10720 104 aa15.02■□□□□ -0
VARS-220ENST00000461874 MGMTP16455 207 aa15.02■□□□□ -0
VARS-220ENST00000461874 MAPK3P27361 379 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms