RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 RTN4IP1Q8WWV3 396 aaPredicted RBP11.37□□□□□ -0.59
DNMT3A-207ENST00000461228 PELI1Q96FA3 418 aa11.37□□□□□ -0.59
DNMT3A-207ENST00000461228 PLSCR3Q9NRY6 295 aa11.37□□□□□ -0.59
DNMT3A-207ENST00000461228 GMPPBQ9Y5P6 360 aa11.37□□□□□ -0.59
DNMT3A-207ENST00000461228 LCE6AA0A183 80 aa11.36□□□□□ -0.59
DNMT3A-207ENST00000461228 ERICH4A6NGS2 130 aa11.36□□□□□ -0.59
DNMT3A-207ENST00000461228 GYG2O15488 501 aa11.36□□□□□ -0.59
DNMT3A-207ENST00000461228 ORC5O43913 435 aa11.36□□□□□ -0.59
DNMT3A-207ENST00000461228 CALCBP10092 127 aa11.36□□□□□ -0.59
DNMT3A-207ENST00000461228 ECI1P42126 302 aa11.36□□□□□ -0.59
DNMT3A-207ENST00000461228 RAB25P57735 213 aa11.36□□□□□ -0.59
DNMT3A-207ENST00000461228 STEAP3Q658P3 488 aa11.36□□□□□ -0.59
DNMT3A-207ENST00000461228 LCNL1Q6ZST4 164 aa11.36□□□□□ -0.59
DNMT3A-207ENST00000461228 RCHY1Q96PM5 261 aa11.36□□□□□ -0.59
DNMT3A-207ENST00000461228 SPACA5Q96QH8 159 aa11.36□□□□□ -0.59
DNMT3A-207ENST00000461228 S1PR3Q99500 378 aa11.36□□□□□ -0.59
DNMT3A-207ENST00000461228 RIBC2Q9H4K1 309 aa11.36□□□□□ -0.59
DNMT3A-207ENST00000461228 FAM118AQ9NWS6 357 aa11.36□□□□□ -0.59
DNMT3A-207ENST00000461228 HYDINQ4G0P3 5121 aa11.36□□□□□ -0.59
DNMT3A-207ENST00000461228 TMEM30CPA0ZSE6 113 aa11.35□□□□□ -0.59
DNMT3A-207ENST00000461228 SNTNA6NMZ2 147 aa11.35□□□□□ -0.59
DNMT3A-207ENST00000461228 C15orf65H3BRN8 121 aa11.35□□□□□ -0.59
DNMT3A-207ENST00000461228 HCKP08631 526 aa11.35□□□□□ -0.59
DNMT3A-207ENST00000461228 TMEM225BP0DP42 221 aa11.35□□□□□ -0.59
DNMT3A-207ENST00000461228 FASP25445 335 aa11.35□□□□□ -0.59
DNMT3A-207ENST00000461228 SOX6P35712 828 aa11.35□□□□□ -0.59
DNMT3A-207ENST00000461228 GNG10P50151 68 aa11.35□□□□□ -0.59
DNMT3A-207ENST00000461228 SCN1BQ07699 218 aa11.35□□□□□ -0.59
DNMT3A-207ENST00000461228 ALKBH1Q13686 389 aaKnown RBP11.35□□□□□ -0.59
DNMT3A-207ENST00000461228 DOC2BQ14184 412 aa11.35□□□□□ -0.59
DNMT3A-207ENST00000461228 MPV17LQ2QL34 196 aa11.35□□□□□ -0.59
DNMT3A-207ENST00000461228 ACBD7Q8N6N7 88 aa11.35□□□□□ -0.59
DNMT3A-207ENST00000461228 OR10AC1Q8NH08 325 aa11.35□□□□□ -0.59
DNMT3A-207ENST00000461228 PLPPR1Q8TBJ4 325 aa11.35□□□□□ -0.59
DNMT3A-207ENST00000461228 MRGPRDQ8TDS7 321 aa11.35□□□□□ -0.59
DNMT3A-207ENST00000461228 DUX3Q96PT4 197 aa11.35□□□□□ -0.59
DNMT3A-207ENST00000461228 LINC00527Q9UJ94 153 aa11.35□□□□□ -0.59
DNMT3A-207ENST00000461228 NCBP2LA6PVI3 153 aaKnown RBP11.34□□□□□ -0.59
DNMT3A-207ENST00000461228 I3L521 148 aa11.34□□□□□ -0.59
DNMT3A-207ENST00000461228 GABRPO00591 440 aa11.34□□□□□ -0.59
DNMT3A-207ENST00000461228 RBM11P57052 281 aaKnown RBP11.34□□□□□ -0.59
DNMT3A-207ENST00000461228 SNRPGP62308 76 aaKnown RBP11.34□□□□□ -0.59
DNMT3A-207ENST00000461228 ZNF616Q08AN1 781 aa11.34□□□□□ -0.59
DNMT3A-207ENST00000461228 ZNF260Q3ZCT1 412 aa11.34□□□□□ -0.59
DNMT3A-207ENST00000461228 FAM27D1Q5T7N8 215 aa11.34□□□□□ -0.59
DNMT3A-207ENST00000461228 SLC25A48Q6ZT89 311 aaKnown RBP11.34□□□□□ -0.59
DNMT3A-207ENST00000461228 LEAP2Q969E1 77 aa11.34□□□□□ -0.59
DNMT3A-207ENST00000461228 CITED4Q96RK1 184 aa11.34□□□□□ -0.59
DNMT3A-207ENST00000461228 RASL11BQ9BPW5 248 aa11.34□□□□□ -0.59
DNMT3A-207ENST00000461228 DPCDQ9BVM2 203 aaPredicted RBP11.34□□□□□ -0.59
DNMT3A-207ENST00000461228 JAM3Q9BX67 310 aa11.34□□□□□ -0.59
DNMT3A-207ENST00000461228 PAK1IP1Q9NWT1 392 aaPredicted RBP11.34□□□□□ -0.59
DNMT3A-207ENST00000461228 GFOD1Q9NXC2 390 aa11.34□□□□□ -0.59
DNMT3A-207ENST00000461228 DAPL1A0PJW8 107 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 LINC01548A6NM66 108 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 HSPB6O14558 160 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 ZNF780AO75290 641 aaPredicted RBP11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 IGLV1-40P01703 118 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 HLA-DRB1P01911 266 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 RAB3AP20336 220 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 PPIFP30405 207 aaKnown RBP11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 CRIP2P52943 208 aaPredicted RBP11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 HNF4GQ14541 408 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 ASPHD1Q5U4P2 390 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 TRAT1Q6PIZ9 186 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 MOB3BQ86TA1 216 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 ZNF554Q86TJ5 538 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 GAPTQ8N292 157 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 ZNF439Q8NDP4 499 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 OR11H1Q8NG94 326 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 SLC7A6OSQ96CW6 309 aaPredicted RBP11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 C4orf36Q96KX1 117 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 KCTD7Q96MP8 289 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 HSPB9Q9BQS6 159 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 OR51J1Q9H342 316 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 SPACA1Q9HBV2 294 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 ISYNA1Q9NPH2 558 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 IMPAD1Q9NX62 359 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 DHDHQ9UQ10 334 aa11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 EXOGQ9Y2C4 368 aaKnown RBP11.33□□□□□ -0.6
DNMT3A-207ENST00000461228 FAM90A10PA6NDY2 464 aa11.32□□□□□ -0.6
DNMT3A-207ENST00000461228 SDCBPO00560 298 aaPredicted RBP11.32□□□□□ -0.6
DNMT3A-207ENST00000461228 MAGEB3O15480 346 aa11.32□□□□□ -0.6
DNMT3A-207ENST00000461228 GALEQ14376 348 aa11.32□□□□□ -0.6
DNMT3A-207ENST00000461228 PIGYQ3MUY2 71 aa11.32□□□□□ -0.6
DNMT3A-207ENST00000461228 ZNF497Q6ZNH5 498 aa11.32□□□□□ -0.6
DNMT3A-207ENST00000461228 LYPD6Q86Y78 171 aa11.32□□□□□ -0.6
DNMT3A-207ENST00000461228 TCTEX1D1Q8N7M0 179 aa11.32□□□□□ -0.6
DNMT3A-207ENST00000461228 SUMF2Q8NBJ7 301 aa11.32□□□□□ -0.6
DNMT3A-207ENST00000461228 TNFAIP8L1Q8WVP5 186 aa11.32□□□□□ -0.6
DNMT3A-207ENST00000461228 RNFT2Q96EX2 444 aa11.32□□□□□ -0.6
DNMT3A-207ENST00000461228 TM2D3Q9BRN9 247 aa11.32□□□□□ -0.6
DNMT3A-207ENST00000461228 RCC2Q9P258 522 aaKnown RBP11.32□□□□□ -0.6
DNMT3A-207ENST00000461228 ZNF107Q9UII5 783 aaPredicted RBP11.32□□□□□ -0.6
DNMT3A-207ENST00000461228 VSIG4Q9Y279 399 aa11.32□□□□□ -0.6
DNMT3A-207ENST00000461228 MRPS28Q9Y2Q9 187 aaKnown RBP11.32□□□□□ -0.6
DNMT3A-207ENST00000461228 PLECQ15149 4684 aaKnown RBP11.32□□□□□ -0.6
DNMT3A-207ENST00000461228 A8MZ25 164 aa11.31□□□□□ -0.6
DNMT3A-207ENST00000461228 ARPC1BO15143 372 aaKnown RBP11.31□□□□□ -0.6
DNMT3A-207ENST00000461228 LANCL1O43813 399 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms