RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 EIF4EP06730 217 aaKnown RBP11.3□□□□□ -0.6
CHRD-209ENST00000461120 GNB3P16520 340 aa11.3□□□□□ -0.6
CHRD-209ENST00000461120 CDK2P24941 298 aa11.3□□□□□ -0.6
CHRD-209ENST00000461120 VMO1Q7Z5L0 202 aa11.3□□□□□ -0.6
CHRD-209ENST00000461120 ZNF565Q8N9K5 539 aa11.3□□□□□ -0.6
CHRD-209ENST00000461120 OR4K15Q8NH41 348 aa11.3□□□□□ -0.6
CHRD-209ENST00000461120 MRGPRDQ8TDS7 321 aa11.3□□□□□ -0.6
CHRD-209ENST00000461120 PHF21AQ96BD5 680 aa11.3□□□□□ -0.6
CHRD-209ENST00000461120 S100A16Q96FQ6 103 aaKnown RBP11.3□□□□□ -0.6
CHRD-209ENST00000461120 CMTM3Q96MX0 182 aa11.3□□□□□ -0.6
CHRD-209ENST00000461120 DCUN1D5Q9BTE7 237 aa11.3□□□□□ -0.6
CHRD-209ENST00000461120 SLIRPQ9GZT3 109 aaKnown RBP11.3□□□□□ -0.6
CHRD-209ENST00000461120 ZMAT3Q9HA38 289 aaKnown RBP11.3□□□□□ -0.6
CHRD-209ENST00000461120 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHRD-209ENST00000461120 DIABLOQ9NR28 239 aa11.3□□□□□ -0.6
CHRD-209ENST00000461120 CDC42EP3Q9UKI2 254 aa11.3□□□□□ -0.6
CHRD-209ENST00000461120 TRAV18A0A075B6X5 111 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 hCG_1809904A0A1W2PP81 198 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 A0A1W2PPE2 198 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 A0A1W2PR64 198 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 A0A1W2PRV1 198 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 ZNF729A6NN14 1252 aaPredicted RBP11.29□□□□□ -0.6
CHRD-209ENST00000461120 SERPINE3A8MV23 424 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 HPGDSO60760 199 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 NAPSAO96009 420 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 FSHBP01225 129 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 APOA1P02647 267 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 RBP4P02753 201 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 PRTN3P24158 256 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 ERVFRD-1P60508 538 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 ARL6IP1Q15041 203 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 C17orf58Q2M2W7 97 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 ZNF260Q3ZCT1 412 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 CDNFQ49AH0 187 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 IL17RELQ6ZVW7 336 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 TEX29Q8N6K0 151 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 CMSS1Q9BQ75 279 aaKnown RBP11.29□□□□□ -0.6
CHRD-209ENST00000461120 HDHD3Q9BSH5 251 aaPredicted RBP11.29□□□□□ -0.6
CHRD-209ENST00000461120 GAL3ST2Q9H3Q3 398 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 RIMS4Q9H426 269 aaPredicted RBP11.29□□□□□ -0.6
CHRD-209ENST00000461120 METTL8Q9H825 291 aaKnown RBP11.29□□□□□ -0.6
CHRD-209ENST00000461120 UNKLQ9H9P5 680 aaKnown RBP11.29□□□□□ -0.6
CHRD-209ENST00000461120 SIRT7Q9NRC8 400 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 CALYQ9NYX4 217 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 TRAPPC2LQ9UL33 140 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 KIAA2026Q5HYC2 2103 aa11.29□□□□□ -0.6
CHRD-209ENST00000461120 TRBV6-6A0A0A6YYG2 114 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 KBTBD11-OT1A0A1B0GTJ5 212 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 A6NHS1 94 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 CTDSP2O14595 271 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 XRCC3O43542 346 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 CLPXO76031 633 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 GSTP1P09211 210 aaKnown RBP11.28□□□□□ -0.6
CHRD-209ENST00000461120 CD3GP09693 182 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 RCC1P18754 421 aaPredicted RBP11.28□□□□□ -0.6
CHRD-209ENST00000461120 ELK1P19419 428 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 GZMHP20718 246 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 HNF1AP20823 631 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 DLX1P56177 255 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 KLF17Q5JT82 389 aaPredicted RBP11.28□□□□□ -0.6
CHRD-209ENST00000461120 C6orf183Q5T699 404 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 PRAMEF5Q5TYX0 476 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 HEPN1Q6WQI6 88 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 Q6ZPA2 131 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 IZUMO1Q8IYV9 350 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 DTX3Q8N9I9 347 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 TNFRSF14Q92956 283 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 NXF2Q9GZY0 626 aaKnown RBP11.28□□□□□ -0.6
CHRD-209ENST00000461120 LINC00574Q9H8X3 128 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 CHMP1AQ9HD42 196 aaPredicted RBP11.28□□□□□ -0.6
CHRD-209ENST00000461120 C12orf4Q9NQ89 552 aa11.28□□□□□ -0.6
CHRD-209ENST00000461120 MBNL3Q9NUK0 354 aaKnown RBP11.28□□□□□ -0.6
CHRD-209ENST00000461120 ELF5Q9UKW6 265 aaPredicted RBP11.28□□□□□ -0.6
CHRD-209ENST00000461120 TRAV40A0A0B4J280 105 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 TMEM235A6NFC5 223 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 C12orf77C9JDV5 145 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 NPIPB11E5RHQ5 1161 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 C15orf65H3BRN8 121 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 ORC5O43913 435 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 MMP23AO75900 390 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 IGHV1-8P0DP01 117 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 IGHV4-38-2P0DP08 117 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 SSTR5P35346 364 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 GDNFP39905 211 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 PRB3Q04118 309 aaPredicted RBP11.27□□□□□ -0.61
CHRD-209ENST00000461120 KLRD1Q13241 179 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 ARFRP1Q13795 201 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 PNLIPRP3Q17RR3 467 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 HACD4Q5VWC8 232 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 ZNF880Q6PDB4 577 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 TRAT1Q6PIZ9 186 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 ZNF782Q6ZMW2 699 aaPredicted RBP11.27□□□□□ -0.61
CHRD-209ENST00000461120 MOB1BQ7L9L4 216 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 SGMS2Q8NHU3 365 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 MCFD2Q8NI22 146 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 RFESDQ8TAC1 157 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 NANPQ8TBE9 248 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 LHX4Q969G2 390 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 MIXL1Q9H2W2 232 aa11.27□□□□□ -0.61
CHRD-209ENST00000461120 AUNIPQ9H7T9 357 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms