RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 TRAV1-1A0A0B4J248 108 aa13.54□□□□□ -0.24
CMTM3-203ENST00000460097 DHRS7CA6NNS2 312 aa13.54□□□□□ -0.24
CMTM3-203ENST00000460097 SHISA8B8ZZ34 492 aa13.54□□□□□ -0.24
CMTM3-203ENST00000460097 HSPA12AO43301 675 aa13.54□□□□□ -0.24
CMTM3-203ENST00000460097 IGHG1P01857 330 aa13.54□□□□□ -0.24
CMTM3-203ENST00000460097 ZNF728P0DKX0 622 aa13.54□□□□□ -0.24
CMTM3-203ENST00000460097 CA7P43166 264 aa13.54□□□□□ -0.24
CMTM3-203ENST00000460097 BIDP55957 195 aa13.54□□□□□ -0.24
CMTM3-203ENST00000460097 GNMTQ14749 295 aa13.54□□□□□ -0.24
CMTM3-203ENST00000460097 TMEM176BQ3YBM2 270 aaPredicted RBP13.54□□□□□ -0.24
CMTM3-203ENST00000460097 KHDC3LQ587J8 217 aa13.54□□□□□ -0.24
CMTM3-203ENST00000460097 PLXDC2Q6UX71 529 aa13.54□□□□□ -0.24
CMTM3-203ENST00000460097 FBXL14Q8N1E6 418 aa13.54□□□□□ -0.24
CMTM3-203ENST00000460097 OR10D4PQ8NGN7 298 aa13.54□□□□□ -0.24
CMTM3-203ENST00000460097 RNASEH2CQ8TDP1 164 aaKnown RBP13.54□□□□□ -0.24
CMTM3-203ENST00000460097 RTN4IP1Q8WWV3 396 aaPredicted RBP13.54□□□□□ -0.24
CMTM3-203ENST00000460097 MSI2Q96DH6 328 aaKnown RBP13.54□□□□□ -0.24
CMTM3-203ENST00000460097 GNPNAT1Q96EK6 184 aaPredicted RBP13.54□□□□□ -0.24
CMTM3-203ENST00000460097 Q96M66 194 aa13.54□□□□□ -0.24
CMTM3-203ENST00000460097 PARP12Q9H0J9 701 aaKnown RBP13.54□□□□□ -0.24
CMTM3-203ENST00000460097 SH3BGRL3Q9H299 93 aa13.54□□□□□ -0.24
CMTM3-203ENST00000460097 B3GAT1Q9P2W7 334 aa13.54□□□□□ -0.24
CMTM3-203ENST00000460097 SH3BGRL2Q9UJC5 107 aa13.54□□□□□ -0.24
CMTM3-203ENST00000460097 RAMP1O60894 148 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 SCGB1D2O95969 90 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 PGA4P0DJD7 388 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 PGA3P0DJD8 388 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 RND3P61587 244 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 EWSR1Q01844 656 aaKnown RBP eCLIP13.53□□□□□ -0.24
CMTM3-203ENST00000460097 HIST3H3Q16695 136 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 FBXW12Q6X9E4 464 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 LILRB2Q8N423 598 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 POC1BQ8TC44 478 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 POM121Q96HA1 1249 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 WDYHV1Q96HA8 205 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 MRGPRX4Q96LA9 322 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 NIPSNAP3BQ9BS92 247 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 SLC25A31Q9H0C2 315 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 MED29Q9NX70 200 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 MED12Q93074 2177 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 LOC102725191A0A1B0GVB3 256 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 AHRRA9YTQ3 701 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 H3BML4 177 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 SCAF4O95104 1147 aaKnown RBP13.53□□□□□ -0.24
CMTM3-203ENST00000460097 LHX2P50458 406 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 DLK1P80370 383 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 BAXQ07812 192 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 FOXF1Q12946 379 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 ZNF124Q15973 351 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 TMEM182Q6ZP80 229 aaPredicted RBP13.53□□□□□ -0.24
CMTM3-203ENST00000460097 ZNF429Q86V71 674 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 COMMD2Q86X83 199 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 FAM185AQ8N0U4 392 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 CCDC71LQ8N9Z2 235 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 OR6X1Q8NH79 312 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 DNAJA3Q96EY1 480 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 FAM71F1Q96KD3 344 aaPredicted RBP13.53□□□□□ -0.24
CMTM3-203ENST00000460097 NOL4LQ96MY1 436 aaPredicted RBP13.53□□□□□ -0.24
CMTM3-203ENST00000460097 PRDM14Q9GZV8 571 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 ZNF319Q9P2F9 582 aa13.53□□□□□ -0.24
CMTM3-203ENST00000460097 MCTS1Q9ULC4 181 aaKnown RBP13.53□□□□□ -0.24
CMTM3-203ENST00000460097 IGKV1D-8A0A087WSZ0 117 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 CCL21O00585 134 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 DHRS3O75911 302 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 CXCL1P09341 107 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 OR5AC1P0C628 307 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 NR2C1P13056 603 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 SELLP14151 372 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 SERPINA2P20848 420 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 CSNK1A1P48729 337 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 LSM6P62312 80 aaKnown RBP13.52□□□□□ -0.25
CMTM3-203ENST00000460097 RAC1P63000 192 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 SRYQ05066 204 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 ICAM4Q14773 271 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 RSU1Q15404 277 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 ACSF3Q4G176 576 aaPredicted RBP13.52□□□□□ -0.25
CMTM3-203ENST00000460097 ABCA11PQ4W5N1 156 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 OR2C3Q8N628 320 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 OR2G3Q8NGZ4 309 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 RAB24Q969Q5 203 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 RELTQ969Z4 430 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 SPIN2AQ99865 258 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 RARRES2Q99969 163 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 SPIN2BQ9BPZ2 258 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 ZNF701Q9NV72 531 aaPredicted RBP13.52□□□□□ -0.25
CMTM3-203ENST00000460097 POLR1DQ9Y2S0 133 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 MMP24Q9Y5R2 645 aa13.52□□□□□ -0.25
CMTM3-203ENST00000460097 TRBV24-1A0A075B6N3 115 aa13.51□□□□□ -0.25
CMTM3-203ENST00000460097 DUXBA0A1W2PPF3 345 aa13.51□□□□□ -0.25
CMTM3-203ENST00000460097 ZNF726A6NNF4 738 aa13.51□□□□□ -0.25
CMTM3-203ENST00000460097 DVL1O14640 695 aa13.51□□□□□ -0.25
CMTM3-203ENST00000460097 WDR1O75083 606 aa13.51□□□□□ -0.25
CMTM3-203ENST00000460097 ATP6V0CP27449 155 aa13.51□□□□□ -0.25
CMTM3-203ENST00000460097 CLRN1P58418 232 aa13.51□□□□□ -0.25
CMTM3-203ENST00000460097 SPCS3P61009 180 aa13.51□□□□□ -0.25
CMTM3-203ENST00000460097 OR8B8Q15620 311 aa13.51□□□□□ -0.25
CMTM3-203ENST00000460097 C4orf17Q53FE4 359 aa13.51□□□□□ -0.25
CMTM3-203ENST00000460097 SPNS3Q6ZMD2 512 aa13.51□□□□□ -0.25
CMTM3-203ENST00000460097 BEND4Q6ZU67 534 aa13.51□□□□□ -0.25
CMTM3-203ENST00000460097 LYZL2Q7Z4W2 148 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms