RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 PDCD10Q9BUL8 212 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 GPN1Q9HCN4 374 aaPredicted RBP8.72□□□□□ -1.01
USP39-210ENST00000459775 ONECUT1Q9UBC0 465 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 ELF5Q9UKW6 265 aaPredicted RBP8.72□□□□□ -1.01
USP39-210ENST00000459775 SLC7A11Q9UPY5 501 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 MRPS28Q9Y2Q9 187 aaKnown RBP8.72□□□□□ -1.01
USP39-210ENST00000459775 CSMD2Q7Z408 3487 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 TMEM272A0A1B0GTI8 110 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 MEGF11A6BM72 1044 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 CDIPTO14735 213 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 KDM4BO94953 1096 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 SFTPBP07988 381 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 VSIG8P0DPA2 414 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 PTHLHP12272 177 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 BMP4P12644 408 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 ARSBP15848 533 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 CEACAM3P40198 252 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 FUT6P51993 359 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 CCL8P80075 99 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 UNC119Q13432 240 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 TESK1Q15569 626 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 LPCAT3Q6P1A2 487 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 SNX29P2Q8IUI4 249 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 FTMTQ8N4E7 242 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 ZNF611Q8N823 705 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 SORCS2Q96PQ0 1159 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 HIST1H2AAQ96QV6 131 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 ASCL2Q99929 193 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 SIRT7Q9NRC8 400 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 IL36RNQ9UBH0 155 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 MPC1Q9Y5U8 109 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 C2CD3Q4AC94 2353 aa8.72□□□□□ -1.01
USP39-210ENST00000459775 OOEPA6NGQ2 149 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 CENPXA8MT69 81 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 H7C2Y5 167 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 K7EP13 123 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 IGHV1-46P01743 117 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 TFF1P04155 84 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 ALDOBP05062 364 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 SOD3P08294 240 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 SERPINA2P20848 420 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 RPS23P62266 143 aaKnown RBP8.71□□□□□ -1.01
USP39-210ENST00000459775 RPL23AP62750 156 aaKnown RBP8.71□□□□□ -1.01
USP39-210ENST00000459775 ZNF154Q13106 437 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 BTN1A1Q13410 526 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 DNLZQ5SXM8 178 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 TMEM88Q6PEY1 159 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 SSX8Q7RTT4 187 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 C11orf53Q8IXP5 236 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 CMTM4Q8IZR5 234 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 PUSL1Q8N0Z8 303 aaKnown RBP8.71□□□□□ -1.01
USP39-210ENST00000459775 SCCPDHQ8NBX0 429 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 OR5A2Q8NGI9 324 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 OR6M1Q8NGM8 313 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 OR13G1Q8NGZ3 307 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 ELMOD3Q96FG2 381 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 ZNF442Q9H7R0 627 aa8.71□□□□□ -1.01
USP39-210ENST00000459775 UBE2J1Q9Y385 318 aaPredicted RBP8.71□□□□□ -1.01
USP39-210ENST00000459775 A6NNC1 897 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 J3QRK9 145 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 LY6HO94772 140 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 ZNF205O95201 554 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 BCL3P20749 454 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 ATP1B3P54709 279 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 QRFPP83859 136 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 MUC15Q8N387 334 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 OR56B1Q8NGI3 324 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 OR51F2Q8NH61 342 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 ITLN1Q8WWA0 313 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 GCDHQ92947 438 aaPredicted RBP8.71□□□□□ -1.02
USP39-210ENST00000459775 ERGIC1Q969X5 290 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 MEGF10Q96KG7 1140 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 OR2V2Q96R30 315 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 NICN1Q9BSH3 213 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 OR51I2Q9H344 312 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 UBTD1Q9HAC8 227 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 YAE1D1Q9NRH1 226 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 RBFOX1Q9NWB1 397 aaKnown RBP8.71□□□□□ -1.02
USP39-210ENST00000459775 PPP1R3CQ9UQK1 317 aa8.71□□□□□ -1.02
USP39-210ENST00000459775 WNT9BO14905 357 aa8.7□□□□□ -1.02
USP39-210ENST00000459775 DUSP1P28562 367 aa8.7□□□□□ -1.02
USP39-210ENST00000459775 PMELP40967 661 aa8.7□□□□□ -1.02
USP39-210ENST00000459775 GNG3P63215 75 aa8.7□□□□□ -1.02
USP39-210ENST00000459775 RNASE10Q5GAN6 216 aaKnown RBP8.7□□□□□ -1.02
USP39-210ENST00000459775 FAM201AQ5SY85 155 aa8.7□□□□□ -1.02
USP39-210ENST00000459775 CNIH2Q6PI25 160 aa8.7□□□□□ -1.02
USP39-210ENST00000459775 CCDC71LQ8N9Z2 235 aa8.7□□□□□ -1.02
USP39-210ENST00000459775 OR4M1Q8NGD0 313 aa8.7□□□□□ -1.02
USP39-210ENST00000459775 NRGNQ92686 78 aa8.7□□□□□ -1.02
USP39-210ENST00000459775 EGLN1Q9GZT9 426 aa8.7□□□□□ -1.02
USP39-210ENST00000459775 WDR13Q9H1Z4 485 aa8.7□□□□□ -1.02
USP39-210ENST00000459775 GFOD1Q9NXC2 390 aa8.7□□□□□ -1.02
USP39-210ENST00000459775 ZNF221Q9UK13 617 aa8.7□□□□□ -1.02
USP39-210ENST00000459775 AKAP6Q13023 2319 aa8.7□□□□□ -1.02
USP39-210ENST00000459775 A0A0A6YYD4 124 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 ADAP1O75689 374 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 MPIG6BO95866 241 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 CYB5R3P00387 301 aaPredicted RBP8.69□□□□□ -1.02
USP39-210ENST00000459775 CD8AP01732 235 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 CHRM2P08172 466 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms