RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 C5orf24Q7Z6I8 188 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 MUC20Q8N307 709 aaPredicted RBP20.38■□□□□ 0.85
U2AF1-204ENST00000459639 DEFB108BQ8NET1 73 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 OR5D13Q8NGL4 314 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 ZFAND1Q8TCF1 268 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 GAFA1Q96PS6 74 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 RTBDNQ9BSG5 229 aaPredicted RBP20.38■□□□□ 0.85
U2AF1-204ENST00000459639 FAM234AQ9H0X4 552 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 DNTTIP1Q9H147 329 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 C14orf166Q9Y224 244 aaKnown RBP20.38■□□□□ 0.85
U2AF1-204ENST00000459639 TRBV6-7A0A0A0MS04 114 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 TRAV39A0A0B4J263 110 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 A0A1W2PPR1 153 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 CD8AP01732 235 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 GYPAP02724 150 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 CTSDP07339 412 aaPredicted RBP20.38■□□□□ 0.85
U2AF1-204ENST00000459639 ZNF728P0DKX0 622 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 AADACP22760 399 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 ZBTB25P24278 435 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 GLIPR1P48060 266 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 DHODHQ02127 395 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 TMEM128Q5BJH2 165 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 TRAT1Q6PIZ9 186 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 LYG2Q86SG7 212 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 ZNRF1Q8ND25 227 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 OR11H7Q8NGC8 314 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 KIRREL1Q96J84 757 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 RAB1BQ9H0U4 201 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 TAF9BQ9HBM6 251 aa20.38■□□□□ 0.85
U2AF1-204ENST00000459639 NKX6-3A6NJ46 265 aa20.37■□□□□ 0.85
U2AF1-204ENST00000459639 A8MV72 311 aaPredicted RBP20.37■□□□□ 0.85
U2AF1-204ENST00000459639 TUSC2O75896 110 aa20.37■□□□□ 0.85
U2AF1-204ENST00000459639 HLA-AP01891 365 aaKnown RBP20.37■□□□□ 0.85
U2AF1-204ENST00000459639 SOD3P08294 240 aa20.37■□□□□ 0.85
U2AF1-204ENST00000459639 AKR1C4P17516 323 aa20.37■□□□□ 0.85
U2AF1-204ENST00000459639 CD83Q01151 205 aa20.37■□□□□ 0.85
U2AF1-204ENST00000459639 PPP1R1AQ13522 171 aa20.37■□□□□ 0.85
U2AF1-204ENST00000459639 HFEQ30201 348 aa20.37■□□□□ 0.85
U2AF1-204ENST00000459639 TMEM230Q96A57 120 aa20.37■□□□□ 0.85
U2AF1-204ENST00000459639 TRAF4Q9BUZ4 470 aaPredicted RBP20.37■□□□□ 0.85
U2AF1-204ENST00000459639 NCOR1P1Q9H4R4 102 aa20.37■□□□□ 0.85
U2AF1-204ENST00000459639 SLC23A1Q9UHI7 598 aa20.37■□□□□ 0.85
U2AF1-204ENST00000459639 SIGLEC5O15389 551 aa20.36■□□□□ 0.85
U2AF1-204ENST00000459639 RNF224P0DH78 156 aa20.36■□□□□ 0.85
U2AF1-204ENST00000459639 FXYD4P59646 89 aa20.36■□□□□ 0.85
U2AF1-204ENST00000459639 EDDM3AQ14507 147 aa20.36■□□□□ 0.85
U2AF1-204ENST00000459639 OR10J5Q8NHC4 309 aa20.36■□□□□ 0.85
U2AF1-204ENST00000459639 TOMM40LQ969M1 308 aa20.36■□□□□ 0.85
U2AF1-204ENST00000459639 LURAP1Q96LR2 239 aa20.36■□□□□ 0.85
U2AF1-204ENST00000459639 RANGRFQ9HD47 186 aaPredicted RBP20.36■□□□□ 0.85
U2AF1-204ENST00000459639 C9orf170A2RU37 121 aa20.35■□□□□ 0.85
U2AF1-204ENST00000459639 FAM172BPA6NC97 362 aa20.35■□□□□ 0.85
U2AF1-204ENST00000459639 P2RX3P56373 397 aa20.35■□□□□ 0.85
U2AF1-204ENST00000459639 IL13RA1P78552 427 aa20.35■□□□□ 0.85
U2AF1-204ENST00000459639 H1FOOQ8IZA3 346 aaPredicted RBP20.35■□□□□ 0.85
U2AF1-204ENST00000459639 SPICQ8N5J4 248 aa20.35■□□□□ 0.85
U2AF1-204ENST00000459639 CCL13Q99616 98 aa20.35■□□□□ 0.85
U2AF1-204ENST00000459639 ODAMA1E959 279 aa20.35■□□□□ 0.85
U2AF1-204ENST00000459639 C12orf77C9JDV5 145 aa20.35■□□□□ 0.85
U2AF1-204ENST00000459639 PI3P19957 117 aa20.35■□□□□ 0.85
U2AF1-204ENST00000459639 ERP29P30040 261 aaKnown RBP20.35■□□□□ 0.85
U2AF1-204ENST00000459639 SLC38A6Q8IZM9 456 aa20.35■□□□□ 0.85
U2AF1-204ENST00000459639 TCTE3Q8IZS6 198 aa20.35■□□□□ 0.85
U2AF1-204ENST00000459639 TPRX1Q8N7U7 411 aa20.35■□□□□ 0.85
U2AF1-204ENST00000459639 IL1F10Q8WWZ1 152 aa20.35■□□□□ 0.85
U2AF1-204ENST00000459639 OPN4Q9UHM6 478 aa20.35■□□□□ 0.85
U2AF1-204ENST00000459639 KIAA2026Q5HYC2 2103 aa20.34■□□□□ 0.85
U2AF1-204ENST00000459639 DOPEY1Q5JWR5 2465 aa20.34■□□□□ 0.85
U2AF1-204ENST00000459639 CXCL3P19876 107 aa20.34■□□□□ 0.85
U2AF1-204ENST00000459639 C12orf45Q8N5I9 185 aaPredicted RBP20.34■□□□□ 0.85
U2AF1-204ENST00000459639 OR13A1Q8NGR1 328 aa20.34■□□□□ 0.85
U2AF1-204ENST00000459639 MRGPRDQ8TDS7 321 aa20.34■□□□□ 0.85
U2AF1-204ENST00000459639 ZNF462Q96JM2 2506 aa20.34■□□□□ 0.85
U2AF1-204ENST00000459639 DSCAML1Q8TD84 2053 aa20.34■□□□□ 0.85
U2AF1-204ENST00000459639 SELLP14151 372 aa20.33■□□□□ 0.85
U2AF1-204ENST00000459639 VAMP1P23763 118 aa20.33■□□□□ 0.85
U2AF1-204ENST00000459639 CR1LQ2VPA4 569 aa20.33■□□□□ 0.85
U2AF1-204ENST00000459639 LPCAT3Q6P1A2 487 aa20.33■□□□□ 0.85
U2AF1-204ENST00000459639 PRR18Q8N4B5 295 aa20.33■□□□□ 0.85
U2AF1-204ENST00000459639 FAM216BQ8N7L0 139 aa20.33■□□□□ 0.85
U2AF1-204ENST00000459639 NEU4Q8WWR8 484 aaPredicted RBP20.33■□□□□ 0.85
U2AF1-204ENST00000459639 GALMQ96C23 342 aa20.33■□□□□ 0.85
U2AF1-204ENST00000459639 ZNF486Q96H40 463 aaPredicted RBP20.33■□□□□ 0.85
U2AF1-204ENST00000459639 FYTTD1Q96QD9 318 aaKnown RBP20.33■□□□□ 0.85
U2AF1-204ENST00000459639 RSRP1Q9BUV0 290 aa20.33■□□□□ 0.85
U2AF1-204ENST00000459639 CLEC4MQ9H2X3 399 aaPredicted RBP20.33■□□□□ 0.85
U2AF1-204ENST00000459639 MGAT4CQ9UBM8 478 aa20.33■□□□□ 0.85
U2AF1-204ENST00000459639 A0A1B0GW55 424 aa20.32■□□□□ 0.84
U2AF1-204ENST00000459639 DUS4LO95620 317 aaKnown RBP20.32■□□□□ 0.84
U2AF1-204ENST00000459639 FSTL3O95633 263 aa20.32■□□□□ 0.84
U2AF1-204ENST00000459639 DUX4L2P0CJ85 424 aa20.32■□□□□ 0.84
U2AF1-204ENST00000459639 DUX4L3P0CJ86 424 aa20.32■□□□□ 0.84
U2AF1-204ENST00000459639 DUX4L4P0CJ87 422 aa20.32■□□□□ 0.84
U2AF1-204ENST00000459639 DUX4L5P0CJ88 424 aa20.32■□□□□ 0.84
U2AF1-204ENST00000459639 DUX4L6P0CJ89 424 aa20.32■□□□□ 0.84
U2AF1-204ENST00000459639 DUX4L7P0CJ90 424 aa20.32■□□□□ 0.84
U2AF1-204ENST00000459639 ANXA3P12429 323 aa20.32■□□□□ 0.84
U2AF1-204ENST00000459639 KCNJ8Q15842 424 aa20.32■□□□□ 0.84
U2AF1-204ENST00000459639 DUX4L9Q6RFH8 374 aaPredicted RBP20.32■□□□□ 0.84
U2AF1-204ENST00000459639 OR2AK2Q8NG84 335 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms