RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CEACAM18A8MTB9 384 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 TRDCB7Z8K6 153 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 FABP7O15540 132 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 PGAM2P15259 253 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 MUC1P15941 1255 aaPredicted RBP7.51□□□□□ -1.21
VPS50-207ENST00000458530 PPOXP50336 477 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 HLA-DRB3P79483 266 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 PAX5Q02548 391 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 PDCD1Q15116 288 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 KCNJ8Q15842 424 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 C6orf183Q5T699 404 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 ZNF626Q68DY1 528 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 SLC35E4Q6ICL7 350 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 LPCAT3Q6P1A2 487 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 ZNF497Q6ZNH5 498 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 TMED4Q7Z7H5 227 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 RTN4RL2Q86UN3 420 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 PRIMA1Q86XR5 153 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 MUC15Q8N387 334 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 OR5D13Q8NGL4 314 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 SPATA3Q8NHX4 192 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 ASB13Q8WXK3 278 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 MAFIPQ8WZ33 124 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 NRGNQ92686 78 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 NEURL2Q9BR09 285 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 TMEM204Q9BSN7 226 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 CLEC4MQ9H2X3 399 aaPredicted RBP7.51□□□□□ -1.21
VPS50-207ENST00000458530 GHITMQ9H3K2 345 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 TMEM165Q9HC07 324 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 GCM1Q9NP62 436 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 ZNF69Q9UC07 566 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 SLC23A1Q9UHI7 598 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 TRAPPC2LQ9UL33 140 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 FLVCR2Q9UPI3 526 aa7.51□□□□□ -1.21
VPS50-207ENST00000458530 FBN1P35555 2871 aaKnown RBP7.51□□□□□ -1.21
VPS50-207ENST00000458530 TRAV38-1A0A0B4J264 116 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 RFPL4AA6NLU0 287 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 OR2AT4A6NND4 320 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 DEFB108AA8MXU0 73 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 RFPL4AL1F8VTS6 287 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 WNT9BO14905 357 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 LHBP01229 141 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 OR4E1P0C645 316 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 ANXA3P12429 323 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 ANXA7P20073 488 aaKnown RBP7.5□□□□□ -1.21
VPS50-207ENST00000458530 S100GP29377 79 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 DAZAP2Q15038 168 aaPredicted RBP7.5□□□□□ -1.21
VPS50-207ENST00000458530 CARTPTQ16568 116 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 ATPAF1Q5TC12 328 aaPredicted RBP7.5□□□□□ -1.21
VPS50-207ENST00000458530 SAMD5Q5TGI4 173 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 ZNF880Q6PDB4 577 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 SLC25A42Q86VD7 318 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 LHFPL1Q86WI0 220 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 GAPTQ8N292 157 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 ZNF561Q8N587 486 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 GCSAMQ8N6F7 178 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 ASCC1Q8N9N2 400 aaKnown RBP7.5□□□□□ -1.21
VPS50-207ENST00000458530 BOLLQ8N9W6 283 aaKnown RBP7.5□□□□□ -1.21
VPS50-207ENST00000458530 CCDC71LQ8N9Z2 235 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 OR13C8Q8NGS7 320 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 MRPL30Q8TCC3 161 aaKnown RBP7.5□□□□□ -1.21
VPS50-207ENST00000458530 ZNF431Q8TF32 576 aaPredicted RBP7.5□□□□□ -1.21
VPS50-207ENST00000458530 DYRK2Q92630 601 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 MBD6Q96DN6 1003 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 ZNF486Q96H40 463 aaPredicted RBP7.5□□□□□ -1.21
VPS50-207ENST00000458530 SNX22Q96L94 193 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 ZNF2Q9BSG1 426 aaPredicted RBP7.5□□□□□ -1.21
VPS50-207ENST00000458530 DNTTIP1Q9H147 329 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 WDR13Q9H1Z4 485 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 ZNF581Q9P0T4 197 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 PCDHB10Q9UN67 800 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 DSCAML1Q8TD84 2053 aa7.5□□□□□ -1.21
VPS50-207ENST00000458530 DSCAMO60469 2012 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 PIGBOS1A0A0B4J2F0 54 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 FAM172BPA6NC97 362 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 OOEPA6NGQ2 149 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 NPIPB11E5RHQ5 1161 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 LGALS8O00214 317 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 SDCBPO00560 298 aaPredicted RBP7.49□□□□□ -1.21
VPS50-207ENST00000458530 MGST3O14880 152 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 HLA-AP01891 365 aaKnown RBP7.49□□□□□ -1.21
VPS50-207ENST00000458530 CTSDP07339 412 aaPredicted RBP7.49□□□□□ -1.21
VPS50-207ENST00000458530 ZNF728P0DKX0 622 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 PSG2P11465 335 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 PRDX2P32119 198 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 GABRA2P47869 451 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 NPY4RP50391 375 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 UCP3P55916 312 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 CCL8P80075 99 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 COL10A1Q03692 680 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 ATXN7L3Q14CW9 347 aaPredicted RBP7.49□□□□□ -1.21
VPS50-207ENST00000458530 ABCA11PQ4W5N1 156 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 TMEM128Q5BJH2 165 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 KRBOX4Q5JUW0 171 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 DHRS11Q6UWP2 260 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 SLC36A1Q7Z2H8 476 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 LYG2Q86SG7 212 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 SLC38A6Q8IZM9 456 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 TCTE3Q8IZS6 198 aa7.49□□□□□ -1.21
VPS50-207ENST00000458530 FAM185AQ8N0U4 392 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms