RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 RPL7L1Q6DKI1 246 aaKnown RBP10.16□□□□□ -0.78
SYNE2-207ENST00000458046 OR10A7Q8NGE5 316 aa10.16□□□□□ -0.78
SYNE2-207ENST00000458046 DNASE2BQ8WZ79 361 aa10.16□□□□□ -0.78
SYNE2-207ENST00000458046 C2orf50Q96LR7 162 aa10.16□□□□□ -0.78
SYNE2-207ENST00000458046 JSRP1Q96MG2 331 aaPredicted RBP10.16□□□□□ -0.78
SYNE2-207ENST00000458046 PITPNC1Q9UKF7 332 aa10.16□□□□□ -0.78
SYNE2-207ENST00000458046 GRPP07492 148 aa10.16□□□□□ -0.78
SYNE2-207ENST00000458046 PRF1P14222 555 aa10.16□□□□□ -0.78
SYNE2-207ENST00000458046 SLC35A1P78382 337 aa10.16□□□□□ -0.78
SYNE2-207ENST00000458046 MST1LQ2TV78 715 aa10.16□□□□□ -0.78
SYNE2-207ENST00000458046 POC1AQ8NBT0 407 aa10.16□□□□□ -0.78
SYNE2-207ENST00000458046 PIGCQ92535 297 aa10.16□□□□□ -0.78
SYNE2-207ENST00000458046 ZNF837Q96EG3 531 aaPredicted RBP10.16□□□□□ -0.78
SYNE2-207ENST00000458046 OCIAD1Q9NX40 245 aa10.16□□□□□ -0.78
SYNE2-207ENST00000458046 MCTS1Q9ULC4 181 aaKnown RBP10.16□□□□□ -0.78
SYNE2-207ENST00000458046 HDGFL3Q9Y3E1 203 aa10.16□□□□□ -0.78
SYNE2-207ENST00000458046 CSDC2Q9Y534 153 aaKnown RBP10.16□□□□□ -0.78
SYNE2-207ENST00000458046 CHCHD2Q9Y6H1 151 aaPredicted RBP10.16□□□□□ -0.78
SYNE2-207ENST00000458046 NCOA6Q14686 2063 aaPredicted RBP10.16□□□□□ -0.78
SYNE2-207ENST00000458046 DHRS7CA6NNS2 312 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 H7C2Y5 167 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 AGPAT2O15120 278 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 TIMM8AO60220 97 aaPredicted RBP10.15□□□□□ -0.78
SYNE2-207ENST00000458046 SERPINA5P05154 406 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 TAS2R46P59540 309 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 ENDOGQ14249 297 aaKnown RBP10.15□□□□□ -0.78
SYNE2-207ENST00000458046 OR2A2Q6IF42 318 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 GJC3Q8NFK1 279 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 CPNE4Q96A23 557 aaPredicted RBP10.15□□□□□ -0.78
SYNE2-207ENST00000458046 ZNF2Q9BSG1 426 aaPredicted RBP10.15□□□□□ -0.78
SYNE2-207ENST00000458046 GCM1Q9NP62 436 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 PLEKHJ1Q9NW61 149 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 ZNF581Q9P0T4 197 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 EXPH5Q8NEV8 1989 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 FOXI3A8MTJ6 420 aaPredicted RBP10.15□□□□□ -0.78
SYNE2-207ENST00000458046 ANGPTL7O43827 346 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 DHRS3O75911 302 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 FARS2O95363 451 aaKnown RBP10.15□□□□□ -0.78
SYNE2-207ENST00000458046 CST4P01036 141 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 KLK3P07288 261 aaPredicted RBP10.15□□□□□ -0.78
SYNE2-207ENST00000458046 PLA2G2AP14555 144 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 NPBWR1P48145 328 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 RRADP55042 308 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 ELLP55199 621 aaPredicted RBP10.15□□□□□ -0.78
SYNE2-207ENST00000458046 TNFRSF9Q07011 255 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 ZNF100Q8IYN0 542 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 SEMA6DQ8NFY4 1073 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 OR5T2Q8NGG2 359 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 AQP10Q96PS8 301 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 MMP26Q9NRE1 261 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 GPR173Q9NS66 373 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 UQCC1Q9NVA1 299 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 NDRG3Q9UGV2 375 aa10.15□□□□□ -0.78
SYNE2-207ENST00000458046 C14orf166Q9Y224 244 aaKnown RBP10.15□□□□□ -0.78
SYNE2-207ENST00000458046 MRPS17Q9Y2R5 130 aaKnown RBP10.15□□□□□ -0.78
SYNE2-207ENST00000458046 MYO7BQ6PIF6 2116 aa10.15□□□□□ -0.79
SYNE2-207ENST00000458046 FTH1P19P0C7X4 201 aa10.14□□□□□ -0.79
SYNE2-207ENST00000458046 TMEM225BP0DP42 221 aa10.14□□□□□ -0.79
SYNE2-207ENST00000458046 LSM6P62312 80 aaKnown RBP10.14□□□□□ -0.79
SYNE2-207ENST00000458046 IAH1Q2TAA2 248 aaPredicted RBP10.14□□□□□ -0.79
SYNE2-207ENST00000458046 SNAI3Q3KNW1 292 aa10.14□□□□□ -0.79
SYNE2-207ENST00000458046 OR2AE1Q8NHA4 323 aa10.14□□□□□ -0.79
SYNE2-207ENST00000458046 SLC25A43Q8WUT9 341 aaPredicted RBP10.14□□□□□ -0.79
SYNE2-207ENST00000458046 SMIM3Q9BZL3 60 aa10.14□□□□□ -0.79
SYNE2-207ENST00000458046 TAF9BQ9HBM6 251 aa10.14□□□□□ -0.79
SYNE2-207ENST00000458046 MLXQ9UH92 298 aa10.14□□□□□ -0.79
SYNE2-207ENST00000458046 NPIPA3F8WFD2 350 aa10.14□□□□□ -0.79
SYNE2-207ENST00000458046 IFNA2P01563 188 aa10.14□□□□□ -0.79
SYNE2-207ENST00000458046 PVALBP20472 110 aaPredicted RBP10.14□□□□□ -0.79
SYNE2-207ENST00000458046 NFYBP25208 207 aa10.14□□□□□ -0.79
SYNE2-207ENST00000458046 THBS4P35443 961 aa10.14□□□□□ -0.79
SYNE2-207ENST00000458046 RBMXP38159 391 aaKnown RBP10.14□□□□□ -0.79
SYNE2-207ENST00000458046 PJVKQ0ZLH3 352 aa10.14□□□□□ -0.79
SYNE2-207ENST00000458046 IL15RAQ13261 267 aa10.14□□□□□ -0.79
SYNE2-207ENST00000458046 RBM39Q14498 530 aaKnown RBP10.14□□□□□ -0.79
SYNE2-207ENST00000458046 SAP25Q8TEE9 199 aa10.14□□□□□ -0.79
SYNE2-207ENST00000458046 ERGIC1Q969X5 290 aa10.14□□□□□ -0.79
SYNE2-207ENST00000458046 FAAP24Q9BTP7 215 aa10.14□□□□□ -0.79
SYNE2-207ENST00000458046 PARP12Q9H0J9 701 aaKnown RBP10.14□□□□□ -0.79
SYNE2-207ENST00000458046 RHOFQ9HBH0 211 aa10.14□□□□□ -0.79
SYNE2-207ENST00000458046 GSN-AS1Q9NRJ2 163 aa10.14□□□□□ -0.79
SYNE2-207ENST00000458046 C19orf25Q9UFG5 118 aaPredicted RBP10.14□□□□□ -0.79
SYNE2-207ENST00000458046 M0R135 149 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 TP53I11O14683 189 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 HEXAP06865 529 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 HKR1P10072 659 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 CCL3P10147 92 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 MUC1P15941 1255 aaPredicted RBP10.13□□□□□ -0.79
SYNE2-207ENST00000458046 EPHA1P21709 976 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 OPRM1P35372 400 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 LPAR6P43657 344 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 MTCP1P56278 107 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 H3F3AP84243 136 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 SPEM2Q0P670 501 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 TAF9Q16594 264 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 SSX9Q7RTT3 188 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 MRPL21Q7Z2W9 205 aaKnown RBP10.13□□□□□ -0.79
SYNE2-207ENST00000458046 C20orf196Q8IYI0 205 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 NABP1Q96AH0 204 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 ZNF799Q96GE5 643 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms