RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 PLSCR4Q9NRQ2 329 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 PLA2G2EQ9NZK7 142 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 FRYQ5TBA9 3013 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 DMXL1Q9Y485 3027 aa14.14□□□□□ -0.15
CCDC43-202ENST00000457422 BORCS7-ASMTA0A0B4J1R7 106 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 PIGBOS1A0A0B4J2F0 54 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 IGHV3-64DA0A0J9YX35 117 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 AHRRA9YTQ3 701 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 SIRPB1O00241 398 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 MED6O75586 246 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 PGLYRP1O75594 196 aaPredicted RBP14.13□□□□□ -0.15
CCDC43-202ENST00000457422 SEC11BP0C7V7 166 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 TUBG1P23258 451 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 DEFA5Q01523 94 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 FOXF2Q12947 444 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 KLF14Q8TD94 323 aaPredicted RBP14.13□□□□□ -0.15
CCDC43-202ENST00000457422 GINS3Q9BRX5 216 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 TUBG2Q9NRH3 451 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 CNOT1A5YKK6 2376 aaKnown RBP14.13□□□□□ -0.15
CCDC43-202ENST00000457422 H0YL77 283 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 CDIPTO14735 213 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 FBXO24O75426 580 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 ADCYAP1P18509 176 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 S100GP29377 79 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 NKX2-1P43699 371 aaPredicted RBP14.13□□□□□ -0.15
CCDC43-202ENST00000457422 CAV2P51636 162 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 AKR1C2P52895 323 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 AKR1C1Q04828 323 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 OR8G1Q15617 311 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 BTNL8Q6UX41 500 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 LYPD6BQ8NI32 183 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 PLPPR1Q8TBJ4 325 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 WFDC1Q9HC57 220 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 HES4Q9HCC6 221 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 ZFHX4Q86UP3 3567 aa14.13□□□□□ -0.15
CCDC43-202ENST00000457422 ASPMQ8IZT6 3477 aa14.12□□□□□ -0.15
CCDC43-202ENST00000457422 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.12□□□□□ -0.15
CCDC43-202ENST00000457422 F2RP25116 425 aa14.12□□□□□ -0.15
CCDC43-202ENST00000457422 SRSF3P84103 164 aaKnown RBP14.12□□□□□ -0.15
CCDC43-202ENST00000457422 OR8G5Q8NG78 346 aa14.12□□□□□ -0.15
CCDC43-202ENST00000457422 TAAR6Q96RI8 345 aa14.12□□□□□ -0.15
CCDC43-202ENST00000457422 HRH4Q9H3N8 390 aa14.12□□□□□ -0.15
CCDC43-202ENST00000457422 MBNL3Q9NUK0 354 aaKnown RBP14.12□□□□□ -0.15
CCDC43-202ENST00000457422 CARHSP1Q9Y2V2 147 aaKnown RBP14.12□□□□□ -0.15
CCDC43-202ENST00000457422 TRAV39A0A0B4J263 110 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 C1QTNF9BB2RNN3 333 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 SH2D1BO14796 132 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 ADAM20O43506 726 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 TNFSF12O43508 249 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 NXPH2O95156 264 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 PVALBP20472 110 aaPredicted RBP14.11□□□□□ -0.15
CCDC43-202ENST00000457422 ARHGDIBP52566 201 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 F2RL1P55085 397 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 OR2C3Q8N628 320 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 NKX6-2Q9C056 277 aaPredicted RBP14.11□□□□□ -0.15
CCDC43-202ENST00000457422 OBP2BQ9NPH6 170 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 FAM212BQ9NTI7 297 aaPredicted RBP14.11□□□□□ -0.15
CCDC43-202ENST00000457422 WIPI2Q9Y4P8 454 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 SPENQ96T58 3664 aaKnown RBP14.11□□□□□ -0.15
CCDC43-202ENST00000457422 WDR1O75083 606 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 IGLV1-44P01699 117 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 GRPP07492 148 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 SPP1P10451 314 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 TCF15Q12870 199 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 SPAG16Q8N0X2 631 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 SVBPQ8N300 66 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 OR10V1Q8NGI7 309 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 TSNAXQ99598 290 aaKnown RBP14.11□□□□□ -0.15
CCDC43-202ENST00000457422 OR1A1Q9P1Q5 309 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 DKK4Q9UBT3 224 aa14.11□□□□□ -0.15
CCDC43-202ENST00000457422 ERRFI1Q9UJM3 462 aaPredicted RBP14.11□□□□□ -0.15
CCDC43-202ENST00000457422 PURGQ9UJV8 347 aaKnown RBP14.11□□□□□ -0.15
CCDC43-202ENST00000457422 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.1□□□□□ -0.15
CCDC43-202ENST00000457422 DNASE2O00115 360 aaPredicted RBP14.1□□□□□ -0.15
CCDC43-202ENST00000457422 TSPAN4O14817 238 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 MLNRO43193 412 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 TNFSF13O75888 250 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 MMP9P14780 707 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 KITLGP21583 273 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 EWSR1Q01844 656 aaKnown RBP eCLIP14.1□□□□□ -0.15
CCDC43-202ENST00000457422 ID3Q02535 119 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 NHLH2Q02577 135 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 ZNF169Q14929 603 aaPredicted RBP14.1□□□□□ -0.15
CCDC43-202ENST00000457422 IGFL3Q6UXB1 125 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 Q6ZRG5 221 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 CXorf67Q86X51 503 aaPredicted RBP14.1□□□□□ -0.15
CCDC43-202ENST00000457422 ZADH2Q8N4Q0 377 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 IL1F10Q8WWZ1 152 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 AKR1E2Q96JD6 320 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 UQCC1Q9NVA1 299 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 TINAGQ9UJW2 476 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 CGAP01215 116 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 DANCRP0C864 163 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 POLR2GP62487 172 aaKnown RBP eCLIP14.1□□□□□ -0.15
CCDC43-202ENST00000457422 TESK1Q15569 626 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 HMGN3Q15651 99 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 FIP1L1Q6UN15 594 aaKnown RBP14.1□□□□□ -0.15
CCDC43-202ENST00000457422 SEC11CQ9BY50 192 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 BCL2L14Q9BZR8 327 aa14.1□□□□□ -0.15
CCDC43-202ENST00000457422 TLNRD1Q9H1K6 362 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms