RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 VHLP40337 213 aa12.07□□□□□ -0.48
CROCCP4-201ENST00000457096 C8orf86Q6ZUL3 223 aa12.07□□□□□ -0.48
CROCCP4-201ENST00000457096 MOB3BQ86TA1 216 aa12.07□□□□□ -0.48
CROCCP4-201ENST00000457096 THNSL2Q86YJ6 484 aa12.07□□□□□ -0.48
CROCCP4-201ENST00000457096 LINC00482Q8N8I6 264 aa12.07□□□□□ -0.48
CROCCP4-201ENST00000457096 ZNF555Q8NEP9 628 aa12.07□□□□□ -0.48
CROCCP4-201ENST00000457096 OR10X1Q8NGY0 326 aa12.07□□□□□ -0.48
CROCCP4-201ENST00000457096 CYGBQ8WWM9 190 aa12.07□□□□□ -0.48
CROCCP4-201ENST00000457096 ARL11Q969Q4 196 aa12.07□□□□□ -0.48
CROCCP4-201ENST00000457096 ZNF184Q99676 751 aaPredicted RBP12.07□□□□□ -0.48
CROCCP4-201ENST00000457096 TMEM138Q9NPI0 162 aa12.07□□□□□ -0.48
CROCCP4-201ENST00000457096 SMPD3Q9NY59 655 aaPredicted RBP12.07□□□□□ -0.48
CROCCP4-201ENST00000457096 SERPINE3A8MV23 424 aa12.06□□□□□ -0.48
CROCCP4-201ENST00000457096 ZNF736B4DX44 427 aaPredicted RBP12.06□□□□□ -0.48
CROCCP4-201ENST00000457096 HSD17B6O14756 317 aa12.06□□□□□ -0.48
CROCCP4-201ENST00000457096 CSTBP04080 98 aaKnown RBP12.06□□□□□ -0.48
CROCCP4-201ENST00000457096 CD2P06729 351 aa12.06□□□□□ -0.48
CROCCP4-201ENST00000457096 IGFBP3P17936 291 aaPredicted RBP12.06□□□□□ -0.48
CROCCP4-201ENST00000457096 RPS11P62280 158 aaKnown RBP eCLIP12.06□□□□□ -0.48
CROCCP4-201ENST00000457096 PPP3R1P63098 170 aa12.06□□□□□ -0.48
CROCCP4-201ENST00000457096 SLC35A2P78381 396 aa12.06□□□□□ -0.48
CROCCP4-201ENST00000457096 MRPL41Q8IXM3 137 aaKnown RBP12.06□□□□□ -0.48
CROCCP4-201ENST00000457096 NEK7Q8TDX7 302 aa12.06□□□□□ -0.48
CROCCP4-201ENST00000457096 GHSRQ92847 366 aa12.06□□□□□ -0.48
CROCCP4-201ENST00000457096 MUL1Q969V5 352 aa12.06□□□□□ -0.48
CROCCP4-201ENST00000457096 MYCBPQ99417 103 aaPredicted RBP12.06□□□□□ -0.48
CROCCP4-201ENST00000457096 NCOR1P1Q9H4R4 102 aa12.06□□□□□ -0.48
CROCCP4-201ENST00000457096 BABAM2Q9NXR7 383 aa12.06□□□□□ -0.48
CROCCP4-201ENST00000457096 ZNF281Q9Y2X9 895 aa12.06□□□□□ -0.48
CROCCP4-201ENST00000457096 IGHV1-3A0A0C4DH29 117 aa12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 TRBV5-5A0A0J9YX44 114 aa12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 TMEM30CPA0ZSE6 113 aa12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 M0QZK8 103 aa12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 CCRL2O00421 344 aa12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 SDCBPO00560 298 aaPredicted RBP12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 DCKP27707 260 aa12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 RIPK1Q13546 671 aa12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 CCDC58Q4VC31 144 aa12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 C11orf87Q6NUJ2 197 aa12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 TMPRSS11AQ6ZMR5 421 aa12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 OR10V1Q8NGI7 309 aa12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 OR4K15Q8NH41 348 aa12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 HAVCR2Q8TDQ0 301 aa12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 SMIM19Q96E16 107 aa12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 CPNE2Q96FN4 548 aaPredicted RBP12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 EAF1Q96JC9 268 aaPredicted RBP12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 PGLYRP3Q96LB9 341 aa12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 BANF2Q9H503 90 aa12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 IL36GQ9NZH8 169 aa12.05□□□□□ -0.48
CROCCP4-201ENST00000457096 DNAH9Q9NYC9 4486 aa12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 MT-ND4P03905 459 aa12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 RAB7AP51149 207 aa12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 RPL23AP62750 156 aaKnown RBP12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 PAX5Q02548 391 aa12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 DEFB121Q5J5C9 76 aa12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 NHLRC3Q5JS37 347 aa12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 DMKNQ6E0U4 476 aaPredicted RBP12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 OR2W3Q7Z3T1 314 aa12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 SLC35E3Q7Z769 313 aa12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 OR8H3Q8N146 312 aa12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 PRR18Q8N4B5 295 aa12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 ZNF485Q8NCK3 441 aa12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 GGHQ92820 318 aa12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 RCC1LQ96I51 464 aaKnown RBP12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 RDH12Q96NR8 316 aa12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 OR14A2Q96R54 314 aa12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 S100A13Q99584 98 aa12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 IFT22Q9H7X7 185 aa12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 PCDHB16Q9NRJ7 776 aa12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 GFOD1Q9NXC2 390 aa12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 DIMT1Q9UNQ2 313 aaKnown RBP12.04□□□□□ -0.48
CROCCP4-201ENST00000457096 NCBP2LA6PVI3 153 aaKnown RBP12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 NUDT19A8MXV4 375 aa12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 C12orf77C9JDV5 145 aa12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 AIPO00170 330 aa12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 MAS1P04201 325 aa12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 MYL12AP19105 171 aa12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 KCNJ3P48549 501 aa12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 THBS3P49746 956 aa12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 ZNF134P52741 427 aa12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 ZNF816Q0VGE8 651 aaPredicted RBP12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 INSL4Q14641 139 aa12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 LAIR2Q6ISS4 152 aa12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 GLIPR1L1Q6UWM5 242 aa12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 ZNF497Q6ZNH5 498 aa12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 JAGN1Q8N5M9 183 aa12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 Q8N6K4 173 aa12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 KLHL30-AS1Q8NEE0 82 aa12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 OR1L1Q8NH94 360 aa12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 TMEM80Q96HE8 168 aa12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 VCXQ9H320 206 aa12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 MRPS28Q9Y2Q9 187 aaKnown RBP12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 EXOSC1Q9Y3B2 195 aaKnown RBP12.03□□□□□ -0.48
CROCCP4-201ENST00000457096 TRBV5-7A0A0A0MS05 114 aa12.02□□□□□ -0.49
CROCCP4-201ENST00000457096 CASQ2O14958 399 aaPredicted RBP12.02□□□□□ -0.49
CROCCP4-201ENST00000457096 RRP9O43818 475 aaKnown RBP12.02□□□□□ -0.49
CROCCP4-201ENST00000457096 IGHG2P01859 326 aa12.02□□□□□ -0.49
CROCCP4-201ENST00000457096 GAPDHP04406 335 aaKnown RBP12.02□□□□□ -0.49
CROCCP4-201ENST00000457096 GNAO1P09471 354 aa12.02□□□□□ -0.49
CROCCP4-201ENST00000457096 GTF2F2P13984 249 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms