RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 KLF5Q13887 457 aaPredicted RBP4.54□□□□□ -1.68
VPS41-209ENST00000457055 FZD2Q14332 565 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 CLEC12BQ2HXU8 276 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 ZNF284Q2VY69 593 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 GAGE2EQ4V326 116 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 MESTQ5EB52 335 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 OR10K2Q6IF99 312 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 EIF5AL1Q6IS14 154 aaKnown RBP4.54□□□□□ -1.68
VPS41-209ENST00000457055 GAGE2AQ6NT46 116 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 FAAP20Q6NZ36 180 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 PRSS54Q6PEW0 395 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 UBALD2Q8IYN6 164 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 OR2L13Q8N349 312 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 TMEM86BQ8N661 226 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 SAMD12Q8N8I0 201 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 OR52L1Q8NGH7 329 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 OR1N2Q8NGR9 330 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 OR2G3Q8NGZ4 309 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 ZNF675Q8TD23 568 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 FAM151AQ8WW52 585 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 DYRK2Q92630 601 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 BORCS7Q96B45 105 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 CSF3RQ99062 836 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 PSMB7Q99436 277 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 NIPSNAP3BQ9BS92 247 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 PBDC1Q9BVG4 233 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 HES7Q9BYE0 225 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 PITPNM3Q9BZ71 974 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 NPFFR1Q9GZQ6 430 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 LYRM2Q9NU23 88 aaPredicted RBP4.54□□□□□ -1.68
VPS41-209ENST00000457055 UQCC1Q9NVA1 299 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 GAGE2DQ9UEU5 116 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.54□□□□□ -1.68
VPS41-209ENST00000457055 HDGFL3Q9Y3E1 203 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 RFNGQ9Y644 331 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 WDR87Q6ZQQ6 2873 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 KMT2EQ8IZD2 1858 aa4.54□□□□□ -1.68
VPS41-209ENST00000457055 ZFHX4Q86UP3 3567 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 A0A087WUU8 490 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 GAGE12JA6NER3 117 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 ZNF814B7Z6K7 855 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 ZNF593O00488 134 aaPredicted RBP4.53□□□□□ -1.68
VPS41-209ENST00000457055 TRIAP1O43715 76 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 UPK1BO75841 260 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 GAGE7O76087 117 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 KCNK2O95069 426 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 CDRT1O95170 752 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 LALBAP00709 142 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 CD8AP01732 235 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 GAGE12FP0CL80 117 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 GAGE12GP0CL81 117 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 GAGE12IP0CL82 117 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 RPL35AP18077 110 aaKnown RBP4.53□□□□□ -1.68
VPS41-209ENST00000457055 ORM2P19652 201 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 AGTR1P30556 359 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 ARPP19P56211 112 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 PFN3P60673 137 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 S100A10P60903 97 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 RPS14P62263 151 aaKnown RBP4.53□□□□□ -1.68
VPS41-209ENST00000457055 DCDP81605 110 aaKnown RBP4.53□□□□□ -1.68
VPS41-209ENST00000457055 HIST1H1AQ02539 215 aaPredicted RBP4.53□□□□□ -1.68
VPS41-209ENST00000457055 GNA12Q03113 381 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 GAGE4Q13068 117 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 KLF9Q13886 244 aaPredicted RBP4.53□□□□□ -1.68
VPS41-209ENST00000457055 MEF2DQ14814 521 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 HERPUD1Q15011 391 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 PEA15Q15121 130 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 CCL14Q16627 93 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 ACOT6Q3I5F7 207 aaPredicted RBP4.53□□□□□ -1.68
VPS41-209ENST00000457055 FAM27D1Q5T7N8 215 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 GGNBP1Q5YKI7 109 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 C11orf87Q6NUJ2 197 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 SFXN4Q6P4A7 337 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 LEG1Q6P5S2 330 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 SHC4Q6S5L8 630 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 MOB1BQ7L9L4 216 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 ZNF720Q7Z2F6 126 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 OR4K17Q8NGC6 315 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 OR51A2Q8NGJ7 313 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 OR13A1Q8NGR1 328 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 RXFP4Q8TDU9 374 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 RND1Q92730 232 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 RPL36ALQ969Q0 106 aaKnown RBP4.53□□□□□ -1.68
VPS41-209ENST00000457055 DDIT4LQ96D03 193 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 ZMYND19Q96E35 227 aaPredicted RBP4.53□□□□□ -1.68
VPS41-209ENST00000457055 SCGB3A2Q96PL1 93 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 OR52B2Q96RD2 323 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 FOXC2Q99958 501 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 PDCD1LG2Q9BQ51 273 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 MRPL57Q9BQC6 102 aaKnown RBP4.53□□□□□ -1.68
VPS41-209ENST00000457055 GINS4Q9BRT9 223 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 SLC25A33Q9BSK2 321 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 OR2J1Q9GZK6 312 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 ZBP1Q9H171 429 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 OR2D2Q9H210 308 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 ELL3Q9HB65 397 aaPredicted RBP4.53□□□□□ -1.68
VPS41-209ENST00000457055 HES4Q9HCC6 221 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 SH2D2AQ9NP31 389 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 MMP26Q9NRE1 261 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 STARD5Q9NSY2 213 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms