RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 PARP16Q8N5Y8 322 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 OR1N2Q8NGR9 330 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 MRGPRDQ8TDS7 321 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 ST6GALNAC6Q969X2 333 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 ISOC1Q96CN7 298 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 KCTD7Q96MP8 289 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 SPACA5Q96QH8 159 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 GABARAPL1Q9H0R8 117 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 OR51J1Q9H342 316 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 GHITMQ9H3K2 345 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 ISYNA1Q9NPH2 558 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 SORL1Q92673 2214 aa11.13□□□□□ -0.63
LYSMD3-202ENST00000453259 HSPB6O14558 160 aa11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 ORC5O43913 435 aa11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 IGHV3-7P01780 117 aa11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 HTR1AP08908 422 aa11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 T-ENOLP0DO92 83 aa11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 GNGT1P63211 74 aa11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 ZNF85Q03923 595 aa11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 GALEQ14376 348 aa11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 DNAL1Q4LDG9 190 aa11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 NHLRC3Q5JS37 347 aa11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 ZNF691Q5VV52 312 aa11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 STEAP3Q658P3 488 aa11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 LINC00596Q86U02 117 aa11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 ZDHHC13Q8IUH4 622 aa11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 OR6Q1Q8NGQ2 317 aa11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 RFESDQ8TAC1 157 aa11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 TRUB1Q8WWH5 349 aaKnown RBP11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 BIRC6Q9NR09 4857 aa11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 HUWE1Q7Z6Z7 4374 aaKnown RBP11.12□□□□□ -0.63
LYSMD3-202ENST00000453259 TMEM30CPA0ZSE6 113 aa11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 OR4C45A6NMZ5 311 aa11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 OVOL1O14753 267 aa11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 ARPC1BO15143 372 aaKnown RBP11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 MAGEB3O15480 346 aa11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 IGLV1-40P01703 118 aa11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 PPIFP30405 207 aaKnown RBP11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 VEGFCP49767 419 aa11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 NANOS3P60323 173 aaKnown RBP11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 MRPL28Q13084 256 aaKnown RBP11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 LTC4SQ16873 150 aa11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 LYPD6Q86Y78 171 aa11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 ZNF491Q8N8L2 437 aa11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 HSPB9Q9BQS6 159 aa11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 TM2D3Q9BRN9 247 aa11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 DPCDQ9BVM2 203 aaPredicted RBP11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 ZNF107Q9UII5 783 aaPredicted RBP11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 MRPS28Q9Y2Q9 187 aaKnown RBP11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 SACSQ9NZJ4 4579 aa11.11□□□□□ -0.63
LYSMD3-202ENST00000453259 EPPK1P58107 5090 aaKnown RBP11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 IGHV3-72A0A0B4J1Y9 119 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 DAPL1A0PJW8 107 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 A8MZ25 164 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 SDCBPO00560 298 aaPredicted RBP11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 LDLRAD4O15165 306 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 MITFO75030 526 aaPredicted RBP11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 GP9P14770 177 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 REG1BP48304 166 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 GYS2P54840 703 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 RSU1Q15404 277 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 ATP6AP1Q15904 470 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 SLC25A30Q5SVS4 291 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 ASCL4Q6XD76 172 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 OR51A4Q8NGJ6 313 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 PLPPR1Q8TBJ4 325 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 EME1Q96AY2 570 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 NR1H4Q96RI1 486 aaPredicted RBP11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 JAM3Q9BX67 310 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 GABARAPL3Q9BY60 117 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 RIBC2Q9H4K1 309 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 PAK1IP1Q9NWT1 392 aaPredicted RBP11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 GFOD1Q9NXC2 390 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 IL36GQ9NZH8 169 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 POMPQ9Y244 141 aa11.1□□□□□ -0.63
LYSMD3-202ENST00000453259 FAM90A10PA6NDY2 464 aa11.09□□□□□ -0.63
LYSMD3-202ENST00000453259 TMEM212A6NML5 194 aa11.09□□□□□ -0.63
LYSMD3-202ENST00000453259 SNTNA6NMZ2 147 aa11.09□□□□□ -0.63
LYSMD3-202ENST00000453259 C15orf65H3BRN8 121 aa11.09□□□□□ -0.63
LYSMD3-202ENST00000453259 J3QRE1 110 aa11.09□□□□□ -0.63
LYSMD3-202ENST00000453259 SAP30O75446 220 aa11.09□□□□□ -0.63
LYSMD3-202ENST00000453259 HLA-DRB1P01911 266 aa11.09□□□□□ -0.63
LYSMD3-202ENST00000453259 OR8U9P0C7N5 309 aa11.09□□□□□ -0.63
LYSMD3-202ENST00000453259 ALKBH1Q13686 389 aaKnown RBP11.09□□□□□ -0.63
LYSMD3-202ENST00000453259 KIAA0141Q14154 515 aaPredicted RBP11.09□□□□□ -0.63
LYSMD3-202ENST00000453259 ASPHD1Q5U4P2 390 aa11.09□□□□□ -0.63
LYSMD3-202ENST00000453259 MEDAGQ5VYS4 303 aa11.09□□□□□ -0.63
LYSMD3-202ENST00000453259 SLC25A48Q6ZT89 311 aaKnown RBP11.09□□□□□ -0.63
LYSMD3-202ENST00000453259 ACBD7Q8N6N7 88 aa11.09□□□□□ -0.63
LYSMD3-202ENST00000453259 OR10AC1Q8NH08 325 aa11.09□□□□□ -0.63
LYSMD3-202ENST00000453259 ARL11Q969Q4 196 aa11.09□□□□□ -0.63
LYSMD3-202ENST00000453259 ERGIC3Q9Y282 383 aa11.09□□□□□ -0.63
LYSMD3-202ENST00000453259 DNAH1Q9P2D7 4330 aa11.09□□□□□ -0.63
LYSMD3-202ENST00000453259 A0A1W2PPE3 182 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 GYG2O15488 501 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 RAB3AP20336 220 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 MPV17LQ2QL34 196 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 ZNF529Q6P280 563 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 ACSM6Q6P461 480 aa11.08□□□□□ -0.64
LYSMD3-202ENST00000453259 TRAT1Q6PIZ9 186 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms