RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 DTD1Q8TEA8 209 aa9.06□□□□□ -0.96
CTC1-202ENST00000449476 GAL3ST2Q9H3Q3 398 aa9.06□□□□□ -0.96
CTC1-202ENST00000449476 PARP11Q9NR21 331 aa9.06□□□□□ -0.96
CTC1-202ENST00000449476 OR5AC2Q9NZP5 309 aa9.06□□□□□ -0.96
CTC1-202ENST00000449476 GALR1P47211 349 aa9.06□□□□□ -0.96
CTC1-202ENST00000449476 H2BFSP57053 126 aa9.06□□□□□ -0.96
CTC1-202ENST00000449476 RHOBP62745 196 aa9.06□□□□□ -0.96
CTC1-202ENST00000449476 NEIL1Q96FI4 390 aaPredicted RBP9.06□□□□□ -0.96
CTC1-202ENST00000449476 SPSB2Q99619 263 aa9.06□□□□□ -0.96
CTC1-202ENST00000449476 MSL2Q9HCI7 577 aa9.06□□□□□ -0.96
CTC1-202ENST00000449476 G6PC2Q9NQR9 355 aa9.06□□□□□ -0.96
CTC1-202ENST00000449476 RCC2Q9P258 522 aaKnown RBP9.06□□□□□ -0.96
CTC1-202ENST00000449476 NYNRINQ9P2P1 1898 aaKnown RBP9.06□□□□□ -0.96
CTC1-202ENST00000449476 ARHGEF17Q96PE2 2063 aaPredicted RBP9.06□□□□□ -0.96
CTC1-202ENST00000449476 MNX1P50219 401 aaPredicted RBP9.05□□□□□ -0.96
CTC1-202ENST00000449476 TMEM50BP56557 158 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 Q5BKY6 102 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 AQP3Q92482 292 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 SLC45A2Q9UMX9 530 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 TRAPPC1Q9Y5R8 145 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 OR5H1A6NKK0 313 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 TGFBR3LH3BV60 316 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 ATP6V0CP27449 155 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 STARD6P59095 220 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 PNRC1Q12796 327 aaPredicted RBP9.05□□□□□ -0.96
CTC1-202ENST00000449476 TMEM255AQ5JRV8 349 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 INO80CQ6PI98 192 aaPredicted RBP9.05□□□□□ -0.96
CTC1-202ENST00000449476 BHLHA15Q7RTS1 189 aaPredicted RBP9.05□□□□□ -0.96
CTC1-202ENST00000449476 TMEM251Q8N6I4 163 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 RIF1Q5UIP0 2472 aaKnown RBP9.05□□□□□ -0.96
CTC1-202ENST00000449476 FBP1P09467 338 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 PSG2P11465 335 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 F2RP25116 425 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 NHLH2Q02577 135 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 BSXQ3C1V8 233 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 ACSM6Q6P461 480 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 ZNRF4Q8WWF5 429 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 ADTRPQ96IZ2 230 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 A0A1B0GU03 582 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 ZNHIT1O43257 154 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 HSBP1O75506 76 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 PRF1P14222 555 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 RAB5AP20339 215 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 KIR2DS2P43631 304 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 GNB2P62879 340 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 IGSF11Q5DX21 431 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 MOGAT3Q86VF5 341 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 TMPRSS5Q9H3S3 457 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 RNF122Q9H9V4 155 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 FKBP11Q9NYL4 201 aa9.05□□□□□ -0.96
CTC1-202ENST00000449476 SPAARA0A1B0GVQ0 90 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 DBX1A6NMT0 343 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 MFNGO00587 321 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 HFEQ30201 348 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 CEACAM21Q3KPI0 293 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 RPEQ96AT9 228 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 GMPPAQ96IJ6 420 aaPredicted RBP9.04□□□□□ -0.96
CTC1-202ENST00000449476 CHRNA10Q9GZZ6 450 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 A0A0G2JK05 382 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 TMEM229AB2RXF0 380 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 TIAF1O95411 115 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 P2RY4P51582 365 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 Q9N2K0 584 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 ZNF71Q9NQZ8 489 aaPredicted RBP9.04□□□□□ -0.96
CTC1-202ENST00000449476 OR1A1Q9P1Q5 309 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 TIMM9Q9Y5J7 89 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 ANK1P16157 1881 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 TMPRSS2O15393 492 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 FGF12P61328 243 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 AESQ08117 197 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 RGP1Q92546 391 aaPredicted RBP9.04□□□□□ -0.96
CTC1-202ENST00000449476 NDFIP1Q9BT67 221 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 RSRP1Q9BUV0 290 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 SPINK4O60575 86 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 KRTDAPP60985 99 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 SNAI3Q3KNW1 292 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 LINC00596Q86U02 117 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 LHFPL5Q8TAF8 219 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 MOB3AQ96BX8 217 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 MISP3Q96FF7 219 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 MS4A3Q96HJ5 214 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 IFT22Q9H7X7 185 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 SH2D2AQ9NP31 389 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 TREM2Q9NZC2 230 aa9.04□□□□□ -0.96
CTC1-202ENST00000449476 NPIPB13A6NJU9 1138 aa9.03□□□□□ -0.96
CTC1-202ENST00000449476 NPIPB4C9JG80 1138 aa9.03□□□□□ -0.96
CTC1-202ENST00000449476 G6PCP35575 357 aa9.03□□□□□ -0.96
CTC1-202ENST00000449476 APCDD1LQ8NCL9 501 aa9.03□□□□□ -0.96
CTC1-202ENST00000449476 ADAMTS17Q8TE56 1095 aa9.03□□□□□ -0.96
CTC1-202ENST00000449476 BARX1Q9HBU1 254 aaPredicted RBP9.03□□□□□ -0.96
CTC1-202ENST00000449476 DOCK6Q96HP0 2047 aa9.03□□□□□ -0.96
CTC1-202ENST00000449476 SERTM2A0A1B0GWG4 89 aa9.03□□□□□ -0.96
CTC1-202ENST00000449476 DUXBA0A1W2PPF3 345 aa9.03□□□□□ -0.96
CTC1-202ENST00000449476 RECKO95980 971 aa9.03□□□□□ -0.96
CTC1-202ENST00000449476 F12P00748 615 aaPredicted RBP9.03□□□□□ -0.96
CTC1-202ENST00000449476 PAX5Q02548 391 aa9.03□□□□□ -0.96
CTC1-202ENST00000449476 PCOLCEQ15113 449 aa9.03□□□□□ -0.96
CTC1-202ENST00000449476 RIPPLY2Q5TAB7 128 aa9.03□□□□□ -0.96
CTC1-202ENST00000449476 MYPOPQ86VE0 399 aaPredicted RBP9.03□□□□□ -0.96
CTC1-202ENST00000449476 ZBTB34Q8NCN2 500 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms