RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 KCNK17Q96T54 332 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 VN1R1Q9GZP7 353 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 PRDM6Q9NQX0 595 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 GNG13Q9P2W3 67 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 SRSF10O75494 262 aaKnown RBP11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 TMEM225BP0DP42 221 aa11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 FAM71F1Q96KD3 344 aaPredicted RBP11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 ZNF552Q9H707 407 aaPredicted RBP11.67□□□□□ -0.54
SYNGAP1-204ENST00000449372 MPDZO75970 2070 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 NDUFS8O00217 210 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 EPHA8P29322 1005 aaPredicted RBP11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 RPL19P84098 196 aaKnown RBP11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 LHFPL1Q86WI0 220 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 LGI3Q8N145 548 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 OR10G4Q8NGN3 311 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 MOB3AQ96BX8 217 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 OR5B12Q96R08 314 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 IL13RA2Q14627 380 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 TEX43Q6ZNM6 134 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 C16orf82Q7Z2V1 217 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 SLC38A9Q8NBW4 561 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 SAP25Q8TEE9 199 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 CLUHP3Q96NS8 147 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 NICN1Q9BSH3 213 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 GPR84Q9NQS5 396 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 PLEKHJ1Q9NW61 149 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 PCNX3Q9H6A9 2034 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 WISP1O95388 367 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 DTYMKP23919 212 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 HERV-K104P61576 105 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 ZNF92Q03936 586 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 TMEM256Q8N2U0 113 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 FGF21Q9NSA1 209 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 NECAP2Q9NVZ3 263 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 PILRBQ9UKJ0 227 aa11.66□□□□□ -0.54
SYNGAP1-204ENST00000449372 UNC13CQ8NB66 2214 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 TRAV39A0A0B4J263 110 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 LOC102723971A0A1B0GUV8 181 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 ONECUT2O95948 504 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 GALR1P47211 349 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 ACTL10Q5JWF8 245 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 PMS2CLQ68D20 193 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 RHBDD2Q6NTF9 364 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 LINC01551Q86U37 167 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 COL27A1Q8IZC6 1860 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 TMEM106BQ9NUM4 274 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 KLRF1Q9NZS2 232 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 ZNF319Q9P2F9 582 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 ADAMTS9Q9P2N4 1935 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 A0A1W2PQM1 296 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 HBE1P02100 147 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 DUSP1P28562 367 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 CSNK1A1P48729 337 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 ADIRFQ15847 76 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 Q6ZVH6 145 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 ZNF738Q8NE65 137 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 OR51G1Q8NGK1 321 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 ADAT3Q96EY9 351 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 SLC7A11Q9UPY5 501 aa11.65□□□□□ -0.54
SYNGAP1-204ENST00000449372 ZFP92A6NM28 416 aa11.65□□□□□ -0.55
SYNGAP1-204ENST00000449372 ST8SIA3O43173 380 aa11.65□□□□□ -0.55
SYNGAP1-204ENST00000449372 QRFPP83859 136 aa11.65□□□□□ -0.55
SYNGAP1-204ENST00000449372 KIF26BQ2KJY2 2108 aa11.65□□□□□ -0.55
SYNGAP1-204ENST00000449372 PEAR1Q5VY43 1037 aaPredicted RBP11.65□□□□□ -0.55
SYNGAP1-204ENST00000449372 RNF2Q99496 336 aa11.65□□□□□ -0.55
SYNGAP1-204ENST00000449372 MAP1LC3B2A6NCE7 125 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 F6UZH7 168 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 OR2D3Q8NGH3 330 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 MAP1LC3BQ9GZQ8 125 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 CALHM2Q9HA72 323 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 ZNF160Q9HCG1 818 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 RNF115Q9Y4L5 304 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 A0A1W2PNV4 684 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 C17orf51A8MQB3 221 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 LMX1BO60663 402 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 TIAF1O95411 115 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 TOMM40O96008 361 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 UBE2G2P60604 165 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 CNN3Q15417 329 aaKnown RBP11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 WDR5BQ86VZ2 330 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 TOMM40LQ969M1 308 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 SPTSSAQ969W0 71 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 ARHGAP5-AS1Q96IT6 56 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 TMEM9BQ9NQ34 198 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 ZNF850A8MQ14 1090 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 ZNF728P0DKX0 622 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 FOXK1P85037 733 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 TPTE2P1Q5T6R2 138 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 GUSBP11Q6P575 273 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 NFAM1Q8NET5 270 aaPredicted RBP11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 VN1R17PQ8TDU5 208 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 BANF2Q9H503 90 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 ZNF581Q9P0T4 197 aa11.64□□□□□ -0.55
SYNGAP1-204ENST00000449372 A0A1B0GUS0 222 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 NUPR1O60356 82 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 MPZL1O95297 269 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 EWSR1Q01844 656 aaKnown RBP eCLIP11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 FBLN7Q53RD9 439 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 LYSMD4Q5XG99 296 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms