RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 SLC33A1O00400 549 aaPredicted RBP11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 SH2D1BO14796 132 aa11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 RGS5O15539 181 aa11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 PSPNO60542 156 aa11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 BLVRBP30043 206 aaPredicted RBP11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 C2orf68Q2NKX9 166 aa11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 UBE2NLQ5JXB2 153 aa11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 MZT2AQ6P582 158 aa11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 Q8N7P7 452 aa11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 ASCC1Q8N9N2 400 aaKnown RBP11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 OR4S1Q8NGB4 309 aa11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 ACOT12Q8WYK0 555 aa11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 H1FXQ92522 213 aaKnown RBP11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 TNFRSF14Q92956 283 aa11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 MRPS24Q96EL2 167 aaKnown RBP11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 URM1Q9BTM9 101 aaKnown RBP11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM234AQ9H0X4 552 aa11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 METTL8Q9H825 291 aaKnown RBP11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 PCDHB16Q9NRJ7 776 aa11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 ING3Q9NXR8 418 aa11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 SLC25A10Q9UBX3 287 aaPredicted RBP11.2□□□□□ -0.62
PDLIM2-213ENST00000448520 MEX3AA1L020 520 aaKnown RBP11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 MEIOCA2RUB1 952 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM25AB3EWG3 89 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM25CB3EWG5 89 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM25GB3EWG6 89 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 ZNF737O75373 536 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 PTHLHP12272 177 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 CHATP28329 748 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 OR3A1P47881 315 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 TMEM50BP56557 158 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 SCAND1P57086 179 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 MPV17LQ2QL34 196 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 PLAC9Q5JTB6 97 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 RAB12Q6IQ22 244 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 C11orf88Q6PI97 169 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 C6orf201Q7Z4U5 140 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM89BQ8N5H3 189 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 SUMF2Q8NBJ7 301 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 TMEM185AQ8NFB2 350 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 OR4M1Q8NGD0 313 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 SDSLQ96GA7 329 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 SULT4A1Q9BR01 284 aa11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 ELF5Q9UKW6 265 aaPredicted RBP11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 PRKDCP78527 4128 aaKnown RBP11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 TET2Q6N021 2002 aaPredicted RBP11.19□□□□□ -0.62
PDLIM2-213ENST00000448520 UBE2QL1A1L167 161 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 SIGLEC5O15389 551 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 TMEM127O75204 238 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 CHRM2P08172 466 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 CSF1P09603 554 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 CDK2P24941 298 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 SAA4P35542 130 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 DYNC1I2Q13409 638 aaKnown RBP11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 EDDM3AQ14507 147 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 ATXN7L3Q14CW9 347 aaPredicted RBP11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 PAN3Q58A45 887 aaKnown RBP11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 SLC35E4Q6ICL7 350 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 CNIH2Q6PI25 160 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 TPRX1Q8N7U7 411 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 CHST4Q8NCG5 386 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 BEND2Q8NDZ0 799 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 OR5D13Q8NGL4 314 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 OR10R2Q8NGX6 335 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM110DQ8TAY7 271 aaPredicted RBP11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 PLPPR1Q8TBJ4 325 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 PTX4Q96A99 478 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 ARHGAP5-AS1Q96IT6 56 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 FAAP24Q9BTP7 215 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 DPCDQ9BVM2 203 aaPredicted RBP11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 PECRQ9BY49 303 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 ABCG5Q9H222 651 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 RCC2Q9P258 522 aaKnown RBP11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 GLS2Q9UI32 602 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 KCNK7Q9Y2U2 307 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 PEX16Q9Y5Y5 336 aa11.18□□□□□ -0.62
PDLIM2-213ENST00000448520 NOTCH3Q9UM47 2321 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 TRAV18A0A075B6X5 111 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 TRAV39A0A0B4J263 110 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 A0A1W2PQ09 198 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 A0A1W2PRD5 423 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 A0A1W2PRF3 423 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 A0A1W2PRM7 423 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 METTL21EPA6NDL7 271 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 PDCD6O75340 191 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 APOA1P02647 267 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 GNB3P16520 340 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 NDUFB7P17568 137 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 LMO1P25800 156 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 TNFSF8P32971 234 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 KIR2DS4P43632 304 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 Q6ZTK2 550 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 LINC00596Q86U02 117 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 ZNF561Q8N587 486 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 OR56B1Q8NGI3 324 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 NEK7Q8TDX7 302 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 COQ2Q96H96 371 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 NEDD4LQ96PU5 975 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 HDHD3Q9BSH5 251 aaPredicted RBP11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 MEGF9Q9H1U4 602 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms