RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 COL4A3Q01955 1670 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 A0A0A6YYD5 115 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 GAGE12HA6NDE8 117 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 TMEM14DPA8MWL7 114 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 H3BRB1 525 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 K7EP34 96 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 MLNRO43193 412 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 ZNF737O75373 536 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 LINC00869P0C866 280 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 CLDN2P57739 230 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 RUNX1Q01196 453 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 RAB30Q15771 203 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 TMEM177Q53S58 311 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 OR10J3Q5JRS4 329 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 C1orf140Q5VVS0 124 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 RD3Q7Z3Z2 195 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 KLHDC9Q8NEP7 349 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 OR10G3Q8NGC4 313 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 OR5A1Q8NGJ0 315 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 ABHD17AQ96GS6 310 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 SPATA25Q9BR10 227 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 RBM24Q9BX46 236 aaKnown RBP9.27□□□□□ -0.93
LINC00342-202ENST00000448494 DECR2Q9NUI1 292 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 JPT1Q9UK76 154 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 RARRES3Q9UL19 164 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 POLR1DQ9Y2S0 133 aa9.27□□□□□ -0.93
LINC00342-202ENST00000448494 TMEM189A5PLL7 270 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 NDUFS4O43181 175 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 PDE6DO43924 150 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 C1orf105O95561 183 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 GPR75O95800 540 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 NGFRP08138 427 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 ZNF728P0DKX0 622 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 ARF3P61204 181 aaPredicted RBP9.26□□□□□ -0.93
LINC00342-202ENST00000448494 NBPF12Q5TAG4 269 aaPredicted RBP9.26□□□□□ -0.93
LINC00342-202ENST00000448494 LCN15Q6UWW0 184 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 TPRG1Q6ZUI0 275 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 ARHGEF39Q8N4T4 335 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 NINJ1Q92982 152 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 LINC00615Q96LM1 132 aaPredicted RBP9.26□□□□□ -0.93
LINC00342-202ENST00000448494 NPFFR1Q9GZQ6 430 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 MRPL18Q9H0U6 180 aaKnown RBP9.26□□□□□ -0.93
LINC00342-202ENST00000448494 ELOVL3Q9HB03 270 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 A0A1W2PR80 420 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 MYADML2A6NDP7 307 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 SDCBPO00560 298 aaPredicted RBP9.26□□□□□ -0.93
LINC00342-202ENST00000448494 BRI3O95415 125 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 FTH1P19P0C7X4 201 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 IGLL1P15814 213 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 OMGP23515 440 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 GPM6AP51674 278 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 DYNLT3P51808 116 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 PIGPP57054 158 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 MLF1P58340 268 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 CCL7P80098 99 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 MRPS34P82930 218 aaKnown RBP9.26□□□□□ -0.93
LINC00342-202ENST00000448494 HLA-BQ31612 363 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 FCRL6Q6DN72 434 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 TCF23Q7RTU1 214 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 NAA60Q9H7X0 242 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 ST20Q9HBF5 79 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 RPRMQ9NS64 109 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 HHLA2Q9UM44 414 aa9.26□□□□□ -0.93
LINC00342-202ENST00000448494 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.25□□□□□ -0.93
LINC00342-202ENST00000448494 PSMB11A5LHX3 300 aa9.25□□□□□ -0.93
LINC00342-202ENST00000448494 NPIPA5E9PKD4 350 aa9.25□□□□□ -0.93
LINC00342-202ENST00000448494 NPIPA3F8WFD2 350 aa9.25□□□□□ -0.93
LINC00342-202ENST00000448494 ZNF324O75467 553 aaPredicted RBP9.25□□□□□ -0.93
LINC00342-202ENST00000448494 PTGER1P34995 402 aa9.25□□□□□ -0.93
LINC00342-202ENST00000448494 PPOXP50336 477 aa9.25□□□□□ -0.93
LINC00342-202ENST00000448494 SNU13P55769 128 aaKnown RBP9.25□□□□□ -0.93
LINC00342-202ENST00000448494 RPS24P62847 133 aaKnown RBP9.25□□□□□ -0.93
LINC00342-202ENST00000448494 IGFBP7Q16270 282 aa9.25□□□□□ -0.93
LINC00342-202ENST00000448494 ASCL4Q6XD76 172 aa9.25□□□□□ -0.93
LINC00342-202ENST00000448494 LYZL2Q7Z4W2 148 aa9.25□□□□□ -0.93
LINC00342-202ENST00000448494 FAM58AQ8N1B3 248 aa9.25□□□□□ -0.93
LINC00342-202ENST00000448494 SLC22A24Q8N4F4 322 aa9.25□□□□□ -0.93
LINC00342-202ENST00000448494 PLPPR1Q8TBJ4 325 aa9.25□□□□□ -0.93
LINC00342-202ENST00000448494 BORCS7Q96B45 105 aa9.25□□□□□ -0.93
LINC00342-202ENST00000448494 NPIPA1Q9UND3 350 aa9.25□□□□□ -0.93
LINC00342-202ENST00000448494 TRBV9A0A0B4J1U6 114 aa9.24□□□□□ -0.93
LINC00342-202ENST00000448494 CENPVL1A0A0U1RR11 272 aa9.24□□□□□ -0.93
LINC00342-202ENST00000448494 LOC102725191A0A1B0GVB3 256 aa9.24□□□□□ -0.93
LINC00342-202ENST00000448494 A0A1B0GWA3 101 aa9.24□□□□□ -0.93
LINC00342-202ENST00000448494 TMEM202A6NGA9 273 aa9.24□□□□□ -0.93
LINC00342-202ENST00000448494 ERI3O43414 337 aaKnown RBP9.24□□□□□ -0.93
LINC00342-202ENST00000448494 CA2P00918 260 aa9.24□□□□□ -0.93
LINC00342-202ENST00000448494 HLA-DRB1P01911 266 aa9.24□□□□□ -0.93
LINC00342-202ENST00000448494 RPS12P25398 132 aaKnown RBP9.24□□□□□ -0.93
LINC00342-202ENST00000448494 PSMB3P49720 205 aa9.24□□□□□ -0.93
LINC00342-202ENST00000448494 SMAD3P84022 425 aaKnown RBP9.24□□□□□ -0.93
LINC00342-202ENST00000448494 PMP22Q01453 160 aa9.24□□□□□ -0.93
LINC00342-202ENST00000448494 CXCL9Q07325 125 aa9.24□□□□□ -0.93
LINC00342-202ENST00000448494 ZNF726P1Q15940 193 aa9.24□□□□□ -0.93
LINC00342-202ENST00000448494 HLA-DRB5Q30154 266 aa9.24□□□□□ -0.93
LINC00342-202ENST00000448494 INO80CQ6PI98 192 aaPredicted RBP9.24□□□□□ -0.93
LINC00342-202ENST00000448494 LSRQ86X29 649 aaPredicted RBP9.24□□□□□ -0.93
LINC00342-202ENST00000448494 OR2M3Q8NG83 312 aa9.24□□□□□ -0.93
LINC00342-202ENST00000448494 OTOSQ8NHW6 89 aa9.24□□□□□ -0.93
LINC00342-202ENST00000448494 MRPL30Q8TCC3 161 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms