RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ATXN8Q156A1 80 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 VAX1Q5SQQ9 334 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 PFN4Q8NHR9 129 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 SMOC1Q9H4F8 434 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 SLC45A1Q9Y2W3 748 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 TMIGD3P0DMS9 266 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-202ENST00000448238 MMP9P14780 707 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 SNAI3Q3KNW1 292 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 C10orf111Q8N326 155 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 RNF182Q8N6D2 247 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 CLEC2LP0C7M8 214 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 SLC25A40Q8TBP6 338 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 SDHCQ99643 169 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-202ENST00000448238 MRPL20Q9BYC9 149 aaKnown RBP7.94□□□□□ -1.14
NIPBL-202ENST00000448238 PLSCR4Q9NRQ2 329 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 ELOVL5Q9NYP7 299 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 ZNF107Q9UII5 783 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-202ENST00000448238 H3BNC9 293 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 FCMRO60667 390 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 CD22P20273 847 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 RIPPLY3P57055 190 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 GGTLC2Q14390 218 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 HSF5Q4G112 596 aaPredicted RBP7.94□□□□□ -1.14
NIPBL-202ENST00000448238 TMEM45BQ96B21 275 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 PRDM14Q9GZV8 571 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 CREBBPQ92793 2442 aa7.94□□□□□ -1.14
NIPBL-202ENST00000448238 HMX2A2RU54 273 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 SP6Q3SY56 376 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 MRAPQ8TCY5 172 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 FGFBP2Q9BYJ0 223 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 IQGAP1P46940 1657 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 IGKV3-7A0A075B6H7 116 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 LINC00587B1AMM8 73 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 CA6P23280 308 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 MARCH3Q86UD3 253 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 OR4C3Q8NH37 302 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 G6PC2Q9NQR9 355 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 J3KRW8 73 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 HYPMO75409 117 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 SNHG28P0DPA3 235 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 NXPH1P58417 271 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 DNM1P46Q6ZS02 220 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 MTFP1Q9UDX5 166 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 DPRXA6NFQ7 191 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 A8MWV9 139 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 VWC2LB2RUY7 222 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 NPIPB8E9PQR5 432 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 NPIPB9F8W1W9 429 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 NPIPB7O75200 414 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 HIST1H4AP62805 103 aaKnown RBP7.93□□□□□ -1.14
NIPBL-202ENST00000448238 PSG9Q00887 426 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 LURAP1LQ8IV03 231 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 ETFBKMTQ8IXQ9 262 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 MS4A7Q9GZW8 240 aaPredicted RBP7.93□□□□□ -1.14
NIPBL-202ENST00000448238 CACNA1HO95180 2353 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 SPRY3O43610 288 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 GJB5O95377 273 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 OR3A4PP47883 348 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 KIAA1644Q3SXP7 199 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 OR52M1Q8NGK5 317 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 SPACA5Q96QH8 159 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 HEXA-AS1Q9H8Q6 139 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 SMCHD1A6NHR9 2005 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 GPX2P18283 190 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 FOXA1P55317 472 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 SUMO3P55854 103 aaPredicted RBP7.93□□□□□ -1.14
NIPBL-202ENST00000448238 FAAP20Q6NZ36 180 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 TMEM160Q9NX00 188 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 NCKAP5O14513 1909 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 LMTK2Q8IWU2 1503 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 HYAL3O43820 417 aaPredicted RBP7.93□□□□□ -1.14
NIPBL-202ENST00000448238 GDF9O60383 454 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 PDCD6O75340 191 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 LRTM2Q8N967 370 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 ABHD14BQ96IU4 210 aa7.93□□□□□ -1.14
NIPBL-202ENST00000448238 ZNF48Q96MX3 618 aaPredicted RBP7.93□□□□□ -1.14
NIPBL-202ENST00000448238 A0A096LPE4 126 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 A0A1W2PPZ6 126 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 TRDCB7Z8K6 153 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 KISS1Q15726 138 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 MESTQ5EB52 335 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 MORN4Q8NDC4 146 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 SORL1Q92673 2214 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 ASPDHA6ND91 283 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 SNRPD3P62318 126 aaKnown RBP7.92□□□□□ -1.14
NIPBL-202ENST00000448238 ZNF56Q15929 161 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 OR10J3Q5JRS4 329 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 TMEM211Q6ICI0 200 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 HSD11B1LQ7Z5J1 315 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 P2RX4Q99571 388 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 MS4A8Q9BY19 250 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 A0A1B0GTH9 108 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 H0YIG0 161 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 CD1AP06126 327 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 ATP6V0CP27449 155 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 MVB12AQ96EY5 273 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 MARVELD1Q9BSK0 173 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 SLC25A19Q9HC21 320 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 MCM3APO60318 1980 aa7.92□□□□□ -1.14
NIPBL-202ENST00000448238 ALKQ9UM73 1620 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms