RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 OR6C3Q9NZP0 311 aa13.81□□□□□ -0.2
CNOT3-204ENST00000447684 ZNF814B7Z6K7 855 aa13.81□□□□□ -0.2
CNOT3-204ENST00000447684 MDH2P40926 338 aaKnown RBP13.81□□□□□ -0.2
CNOT3-204ENST00000447684 TNFRSF4P43489 277 aa13.81□□□□□ -0.2
CNOT3-204ENST00000447684 HIST1H3AP68431 136 aa13.81□□□□□ -0.2
CNOT3-204ENST00000447684 TMEM41BQ5BJD5 291 aa13.81□□□□□ -0.2
CNOT3-204ENST00000447684 ZNF818PQ6ZRF7 136 aa13.81□□□□□ -0.2
CNOT3-204ENST00000447684 NEK7Q8TDX7 302 aa13.81□□□□□ -0.2
CNOT3-204ENST00000447684 SLC39A9Q9NUM3 307 aa13.81□□□□□ -0.2
CNOT3-204ENST00000447684 TRAPPC6AO75865 159 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 CD82P27701 267 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 PAX9P55771 341 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 MEF2BQ02080 365 aaPredicted RBP13.8□□□□□ -0.2
CNOT3-204ENST00000447684 ID3Q02535 119 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 FAM78BQ5VT40 261 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 SLC22A18ASQ8N1D0 253 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 C11orf42Q8N5U0 333 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 OR4F5Q8NH21 305 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 OR4F4Q96R69 305 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 OR2J1Q9GZK6 312 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 ASCL3Q9NQ33 180 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 TRAPPC1Q9Y5R8 145 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 WDR87Q6ZQQ6 2873 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 CHD9Q3L8U1 2897 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 IGHV5-51A0A0C4DH38 117 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 A0A0U1RQK1 487 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 ZNF320A2RRD8 509 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 KBTBD11O94819 623 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 SNAI3Q3KNW1 292 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 ST8SIA1Q92185 356 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 ZNF845Q96IR2 970 aaPredicted RBP13.8□□□□□ -0.2
CNOT3-204ENST00000447684 PARLQ9H300 379 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 DNAJC4Q9NNZ3 241 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 WNT16Q9UBV4 365 aa13.8□□□□□ -0.2
CNOT3-204ENST00000447684 LAMA1P25391 3075 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 DOCK11Q5JSL3 2073 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 IGKV1-27A0A075B6S5 117 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 ANKUB1A6NFN9 424 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 H3BMH7 237 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 EFNA2O43921 213 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 PDGFBP01127 241 aaPredicted RBP13.79□□□□□ -0.2
CNOT3-204ENST00000447684 CCL5P13501 91 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 VDAC1P21796 283 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 GCH1P30793 250 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 UCP3P55916 312 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 MALLQ13021 153 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 SLC25A47Q6Q0C1 308 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 BORCS8Q96FH0 119 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 PATZ1Q9HBE1 687 aaKnown RBP13.79□□□□□ -0.2
CNOT3-204ENST00000447684 PLEK2Q9NYT0 353 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 KLRF1Q9NZS2 232 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 PPIAL4AQ9Y536 164 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 COL5A1P20908 1838 aaPredicted RBP13.79□□□□□ -0.2
CNOT3-204ENST00000447684 GRIFINA4D1Z8 144 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 M0R135 149 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 HSPB6O14558 160 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 PLPPR1Q8TBJ4 325 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 MRPL30Q8TCC3 161 aaKnown RBP13.79□□□□□ -0.2
CNOT3-204ENST00000447684 GATAD1Q8WUU5 269 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 ZCCHC14Q8WYQ9 949 aaKnown RBP13.79□□□□□ -0.2
CNOT3-204ENST00000447684 ZNF799Q96GE5 643 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 TMEM56Q96MV1 263 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 TMEM56-RWDD3S4R434 201 aa13.79□□□□□ -0.2
CNOT3-204ENST00000447684 A0A1W2PNV4 684 aa13.78□□□□□ -0.2
CNOT3-204ENST00000447684 TRAF3IP2O43734 574 aaPredicted RBP13.78□□□□□ -0.2
CNOT3-204ENST00000447684 CRYABP02511 175 aaKnown RBP13.78□□□□□ -0.2
CNOT3-204ENST00000447684 COTL1Q14019 142 aa13.78□□□□□ -0.2
CNOT3-204ENST00000447684 Q6ZPA2 131 aa13.78□□□□□ -0.2
CNOT3-204ENST00000447684 OSR2Q8N2R0 312 aa13.78□□□□□ -0.2
CNOT3-204ENST00000447684 OR1N1Q8NGS0 311 aa13.78□□□□□ -0.2
CNOT3-204ENST00000447684 SLC25A22Q9H936 323 aa13.78□□□□□ -0.2
CNOT3-204ENST00000447684 REV3LO60673 3130 aa13.78□□□□□ -0.2
CNOT3-204ENST00000447684 IGKV3D-11A0A0A0MRZ8 115 aa13.78□□□□□ -0.2
CNOT3-204ENST00000447684 C17orf67Q0P5P2 114 aa13.78□□□□□ -0.2
CNOT3-204ENST00000447684 EIF3IQ13347 325 aaKnown RBP13.78□□□□□ -0.2
CNOT3-204ENST00000447684 NMSQ5H8A3 153 aa13.78□□□□□ -0.2
CNOT3-204ENST00000447684 ALKBH2Q6NS38 261 aa13.78□□□□□ -0.2
CNOT3-204ENST00000447684 OR51H1Q8NH63 302 aa13.78□□□□□ -0.2
CNOT3-204ENST00000447684 MIEN1Q9BRT3 115 aa13.78□□□□□ -0.2
CNOT3-204ENST00000447684 IL23AQ9NPF7 189 aa13.78□□□□□ -0.2
CNOT3-204ENST00000447684 FOXJ2Q9P0K8 574 aa13.78□□□□□ -0.2
CNOT3-204ENST00000447684 LILRA1O75019 489 aa13.77□□□□□ -0.2
CNOT3-204ENST00000447684 GYPAP02724 150 aa13.77□□□□□ -0.2
CNOT3-204ENST00000447684 KCNIP4Q6PIL6 250 aa13.77□□□□□ -0.2
CNOT3-204ENST00000447684 CISD2Q8N5K1 135 aaKnown RBP13.77□□□□□ -0.2
CNOT3-204ENST00000447684 VN1R17PQ8TDU5 208 aa13.77□□□□□ -0.2
CNOT3-204ENST00000447684 MBD3L1Q8WWY6 194 aa13.77□□□□□ -0.2
CNOT3-204ENST00000447684 RBM24Q9BX46 236 aaKnown RBP13.77□□□□□ -0.2
CNOT3-204ENST00000447684 CCL28Q9NRJ3 127 aa13.77□□□□□ -0.2
CNOT3-204ENST00000447684 TAAR3PQ9P1P4 343 aa13.77□□□□□ -0.2
CNOT3-204ENST00000447684 A0A0G2JRQ6 117 aa13.77□□□□□ -0.21
CNOT3-204ENST00000447684 BMP5P22003 454 aa13.77□□□□□ -0.21
CNOT3-204ENST00000447684 MSX1P28360 303 aa13.77□□□□□ -0.21
CNOT3-204ENST00000447684 PSMB3P49720 205 aa13.77□□□□□ -0.21
CNOT3-204ENST00000447684 WDR5BQ86VZ2 330 aa13.77□□□□□ -0.21
CNOT3-204ENST00000447684 GJC3Q8NFK1 279 aa13.77□□□□□ -0.21
CNOT3-204ENST00000447684 POC1BQ8TC44 478 aa13.77□□□□□ -0.21
CNOT3-204ENST00000447684 RNF115Q9Y4L5 304 aa13.77□□□□□ -0.21
CNOT3-204ENST00000447684 UNC13CQ8NB66 2214 aa13.77□□□□□ -0.21
CNOT3-204ENST00000447684 IGKV1D-13A0A0B4J2D9 117 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms