RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 P2RX4Q99571 388 aa12.17□□□□□ -0.46
SEC13-213ENST00000445064 MCRIP2Q9BUT9 160 aaKnown RBP12.17□□□□□ -0.46
SEC13-213ENST00000445064 GPR61Q9BZJ8 451 aa12.17□□□□□ -0.46
SEC13-213ENST00000445064 METTL9Q9H1A3 318 aa12.17□□□□□ -0.46
SEC13-213ENST00000445064 MRPS18AQ9NVS2 196 aaKnown RBP12.17□□□□□ -0.46
SEC13-213ENST00000445064 RPL36Q9Y3U8 105 aaKnown RBP12.17□□□□□ -0.46
SEC13-213ENST00000445064 LOC100130705A0A1B0GUX0 176 aa12.16□□□□□ -0.46
SEC13-213ENST00000445064 GEMIN2O14893 280 aaKnown RBP12.16□□□□□ -0.46
SEC13-213ENST00000445064 CSTBP04080 98 aaKnown RBP12.16□□□□□ -0.46
SEC13-213ENST00000445064 CD2P06729 351 aa12.16□□□□□ -0.46
SEC13-213ENST00000445064 ZNF93P35789 620 aaPredicted RBP12.16□□□□□ -0.46
SEC13-213ENST00000445064 ZNF816Q0VGE8 651 aaPredicted RBP12.16□□□□□ -0.46
SEC13-213ENST00000445064 ATAD3CQ5T2N8 411 aa12.16□□□□□ -0.46
SEC13-213ENST00000445064 ZFP1Q6P2D0 407 aa12.16□□□□□ -0.46
SEC13-213ENST00000445064 RPL22L1Q6P5R6 122 aaKnown RBP12.16□□□□□ -0.46
SEC13-213ENST00000445064 ZNF695Q8IW36 515 aa12.16□□□□□ -0.46
SEC13-213ENST00000445064 APH1BQ8WW43 257 aa12.16□□□□□ -0.46
SEC13-213ENST00000445064 TMEM106AQ96A25 262 aa12.16□□□□□ -0.46
SEC13-213ENST00000445064 RBMXL1Q96E39 390 aaKnown RBP12.16□□□□□ -0.46
SEC13-213ENST00000445064 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.16□□□□□ -0.46
SEC13-213ENST00000445064 IGHV3-43A0A0B4J1X8 118 aa12.15□□□□□ -0.46
SEC13-213ENST00000445064 TMEM30CPA0ZSE6 113 aa12.15□□□□□ -0.46
SEC13-213ENST00000445064 C15orf65H3BRN8 121 aa12.15□□□□□ -0.46
SEC13-213ENST00000445064 SDCBPO00560 298 aaPredicted RBP12.15□□□□□ -0.46
SEC13-213ENST00000445064 IGHV3-43DP0DP04 118 aa12.15□□□□□ -0.46
SEC13-213ENST00000445064 VSIG8P0DPA2 414 aa12.15□□□□□ -0.46
SEC13-213ENST00000445064 SERPINA2P20848 420 aa12.15□□□□□ -0.46
SEC13-213ENST00000445064 ETV1P50549 477 aa12.15□□□□□ -0.46
SEC13-213ENST00000445064 RBM11P57052 281 aaKnown RBP12.15□□□□□ -0.46
SEC13-213ENST00000445064 SMN1Q16637 294 aaKnown RBP12.15□□□□□ -0.46
SEC13-213ENST00000445064 DDI2Q5TDH0 399 aa12.15□□□□□ -0.46
SEC13-213ENST00000445064 OR2G6Q5TZ20 316 aa12.15□□□□□ -0.46
SEC13-213ENST00000445064 UNQ9370/PRO34162Q6UXP9 181 aa12.15□□□□□ -0.46
SEC13-213ENST00000445064 COMMD1Q8N668 190 aa12.15□□□□□ -0.46
SEC13-213ENST00000445064 S100A13Q99584 98 aa12.15□□□□□ -0.46
SEC13-213ENST00000445064 B9D2Q9BPU9 175 aa12.15□□□□□ -0.46
SEC13-213ENST00000445064 C9orf16Q9BUW7 83 aa12.15□□□□□ -0.46
SEC13-213ENST00000445064 IFT22Q9H7X7 185 aa12.15□□□□□ -0.46
SEC13-213ENST00000445064 TMEM138Q9NPI0 162 aa12.15□□□□□ -0.46
SEC13-213ENST00000445064 SIRT4Q9Y6E7 314 aaPredicted RBP12.15□□□□□ -0.46
SEC13-213ENST00000445064 COL7A1Q02388 2944 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 A0A1W2PP11 408 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 CCL24O00175 119 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 RPLP1P05386 114 aaKnown RBP12.14□□□□□ -0.47
SEC13-213ENST00000445064 BDKRB2P30411 391 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 SLC6A1P30531 599 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 RAB25P57735 213 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 PNLIPRP3Q17RR3 467 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 CCDC58Q4VC31 144 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 NHLRC3Q5JS37 347 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 TEX38Q6PEX7 206 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 LCNL1Q6ZST4 164 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 TGIF2LXQ8IUE1 241 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 LINC00311Q8N616 119 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 Q8N6K4 173 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 Q8N9W7 124 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 OR52M1Q8NGK5 317 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 OR2T10Q8NGZ9 312 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 NEK7Q8TDX7 302 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 TFAP2CQ92754 450 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 RAX2Q96IS3 184 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 ABCG5Q9H222 651 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 DCLRE1BQ9H816 532 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 FGF20Q9NP95 211 aaPredicted RBP12.14□□□□□ -0.47
SEC13-213ENST00000445064 GFOD1Q9NXC2 390 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 IL36GQ9NZH8 169 aa12.14□□□□□ -0.47
SEC13-213ENST00000445064 ZNF736B4DX44 427 aaPredicted RBP12.13□□□□□ -0.47
SEC13-213ENST00000445064 AP4M1O00189 453 aa12.13□□□□□ -0.47
SEC13-213ENST00000445064 ORC5O43913 435 aa12.13□□□□□ -0.47
SEC13-213ENST00000445064 MT-ND4P03905 459 aa12.13□□□□□ -0.47
SEC13-213ENST00000445064 GPR12P47775 334 aa12.13□□□□□ -0.47
SEC13-213ENST00000445064 PPP3R1P63098 170 aa12.13□□□□□ -0.47
SEC13-213ENST00000445064 DGCR2P98153 550 aa12.13□□□□□ -0.47
SEC13-213ENST00000445064 SLC22A6Q4U2R8 563 aa12.13□□□□□ -0.47
SEC13-213ENST00000445064 IZUMO1Q8IYV9 350 aa12.13□□□□□ -0.47
SEC13-213ENST00000445064 OR13C5Q8NGS8 318 aa12.13□□□□□ -0.47
SEC13-213ENST00000445064 RTN4IP1Q8WWV3 396 aaPredicted RBP12.13□□□□□ -0.47
SEC13-213ENST00000445064 ST6GALNAC6Q969X2 333 aa12.13□□□□□ -0.47
SEC13-213ENST00000445064 PLSCR3Q9NRY6 295 aa12.13□□□□□ -0.47
SEC13-213ENST00000445064 LIN7CQ9NUP9 197 aaKnown RBP12.13□□□□□ -0.47
SEC13-213ENST00000445064 H0YHG0 523 aa12.12□□□□□ -0.47
SEC13-213ENST00000445064 AIPO00170 330 aa12.12□□□□□ -0.47
SEC13-213ENST00000445064 SLC31A2O15432 143 aa12.12□□□□□ -0.47
SEC13-213ENST00000445064 OGG1O15527 345 aa12.12□□□□□ -0.47
SEC13-213ENST00000445064 WBP4O75554 376 aaKnown RBP12.12□□□□□ -0.47
SEC13-213ENST00000445064 CD1BP29016 333 aa12.12□□□□□ -0.47
SEC13-213ENST00000445064 GPR50Q13585 617 aa12.12□□□□□ -0.47
SEC13-213ENST00000445064 MPV17LQ2QL34 196 aa12.12□□□□□ -0.47
SEC13-213ENST00000445064 DEFB136Q30KP8 78 aa12.12□□□□□ -0.47
SEC13-213ENST00000445064 TMPRSS11AQ6ZMR5 421 aa12.12□□□□□ -0.47
SEC13-213ENST00000445064 ZNF497Q6ZNH5 498 aa12.12□□□□□ -0.47
SEC13-213ENST00000445064 LINC00596Q86U02 117 aa12.12□□□□□ -0.47
SEC13-213ENST00000445064 TMEM104Q8NE00 496 aa12.12□□□□□ -0.47
SEC13-213ENST00000445064 ZNF184Q99676 751 aaPredicted RBP12.12□□□□□ -0.47
SEC13-213ENST00000445064 RASL11BQ9BPW5 248 aa12.12□□□□□ -0.47
SEC13-213ENST00000445064 PAK1IP1Q9NWT1 392 aaPredicted RBP12.12□□□□□ -0.47
SEC13-213ENST00000445064 BABAM2Q9NXR7 383 aa12.12□□□□□ -0.47
SEC13-213ENST00000445064 ZNF780AO75290 641 aaPredicted RBP12.11□□□□□ -0.47
SEC13-213ENST00000445064 MOSP00540 346 aa12.11□□□□□ -0.47
SEC13-213ENST00000445064 LALBAP00709 142 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms