RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 H3BUI4 141 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 MRPS14O60783 128 aaKnown RBP8.68□□□□□ -1.02
SF3A1-203ENST00000444440 OR7C1O76099 320 aaPredicted RBP8.68□□□□□ -1.02
SF3A1-203ENST00000444440 IL1AP01583 271 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 GTF2F2P13984 249 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 PSMA1P25786 263 aaKnown RBP8.68□□□□□ -1.02
SF3A1-203ENST00000444440 RANBP1P43487 201 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 KCNJ3P48549 501 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 TPBGQ13641 420 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 RBM39Q14498 530 aaKnown RBP8.68□□□□□ -1.02
SF3A1-203ENST00000444440 SLC22A6Q4U2R8 563 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 FAM27D1Q5T7N8 215 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 OR52W1Q6IF63 320 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 C10orf99Q6UWK7 81 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 UNQ9370/PRO34162Q6UXP9 181 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 CEACAM19Q7Z692 300 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 C5orf24Q7Z6I8 188 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 LINC00596Q86U02 117 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 ZNF565Q8N9K5 539 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 OR4D6Q8NGJ1 314 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 ZNF596Q8TC21 504 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 PHYHIPQ92561 330 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 MUL1Q969V5 352 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 MRPS24Q96EL2 167 aaKnown RBP8.68□□□□□ -1.02
SF3A1-203ENST00000444440 CITED2Q99967 270 aaPredicted RBP8.68□□□□□ -1.02
SF3A1-203ENST00000444440 UQCC2Q9BRT2 126 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 YTHDF1Q9BYJ9 559 aaKnown RBP8.68□□□□□ -1.02
SF3A1-203ENST00000444440 PRSS22Q9GZN4 317 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 MMP28Q9H239 520 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 NCOR1P1Q9H4R4 102 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 IFT22Q9H7X7 185 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 LINC00574Q9H8X3 128 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 PITPNC1Q9UKF7 332 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 PSG11Q9UQ72 335 aa8.68□□□□□ -1.02
SF3A1-203ENST00000444440 MRPS28Q9Y2Q9 187 aaKnown RBP8.68□□□□□ -1.02
SF3A1-203ENST00000444440 RRP15Q9Y3B9 282 aaKnown RBP8.68□□□□□ -1.02
SF3A1-203ENST00000444440 A0A1W2PPI3 338 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 LEUTXA8MZ59 168 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 G3V4G9 280 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 C15orf65H3BRN8 121 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 J3QR06 171 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 DENRO43583 198 aaKnown RBP8.67□□□□□ -1.02
SF3A1-203ENST00000444440 FBXO24O75426 580 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 CPEP16870 476 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 SRMP19623 302 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 GNG10P50151 68 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 MLLT11Q13015 90 aaPredicted RBP8.67□□□□□ -1.02
SF3A1-203ENST00000444440 MPV17LQ2QL34 196 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 NSUN5P1Q3KNT7 163 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 TCTEX1D4Q5JR98 221 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 LIPKQ5VXJ0 399 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 GLT8D1Q68CQ7 371 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 C11orf88Q6PI97 169 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 TMEM104Q8NE00 496 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 MGLLQ99685 303 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 SLC25A33Q9BSK2 321 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 BANF2Q9H503 90 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 GHRLQ9UBU3 117 aa8.67□□□□□ -1.02
SF3A1-203ENST00000444440 IGHV3-43A0A0B4J1X8 118 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 FAM90A18PA6NE21 464 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 FAM90A16PA6NEW6 464 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 FAM90A20PA6NIJ5 464 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 FAM90A9PA6NNJ1 464 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 FAM90A12PA8MX19 464 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 FAM90A5PA8MXJ8 464 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 TOR1AO14656 332 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 ARL6IP5O75915 188 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 FAM90A15PP0C7V4 464 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 FAM90A13PP0C7W8 464 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 FAM90A14PP0C7W9 464 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 FAM90A24PP0C7X0 464 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 UBBP0CG47 229 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 IGHV3-43DP0DP04 118 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 VDAC2P45880 294 aaPredicted RBP8.66□□□□□ -1.02
SF3A1-203ENST00000444440 GABARAPL2P60520 117 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 ABCA11PQ4W5N1 156 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 HSD17B12Q53GQ0 312 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 ATAD3CQ5T2N8 411 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 AWAT2Q6E213 333 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 SIGIRRQ6IA17 410 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 GLIPR1L1Q6UWM5 242 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 SVOPQ8N4V2 548 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 OR56B4Q8NH76 319 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 OR9G1Q8NH87 305 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 CCDC107Q8WV48 283 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 TMEM203Q969S6 136 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 RBM14Q96PK6 669 aaKnown RBP8.66□□□□□ -1.02
SF3A1-203ENST00000444440 KCNK15Q9H427 330 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 LIN7BQ9HAP6 207 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 SPACA1Q9HBV2 294 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 ACOT13Q9NPJ3 140 aa8.66□□□□□ -1.02
SF3A1-203ENST00000444440 RCC2Q9P258 522 aaKnown RBP8.66□□□□□ -1.02
SF3A1-203ENST00000444440 MCRIP1C9JLW8 97 aa8.65□□□□□ -1.02
SF3A1-203ENST00000444440 SLC31A2O15432 143 aa8.65□□□□□ -1.02
SF3A1-203ENST00000444440 OR2F2O95006 317 aa8.65□□□□□ -1.02
SF3A1-203ENST00000444440 OPN1MWP04001 364 aa8.65□□□□□ -1.02
SF3A1-203ENST00000444440 LPLP06858 475 aa8.65□□□□□ -1.02
SF3A1-203ENST00000444440 SNRNP70P08621 437 aaKnown RBP8.65□□□□□ -1.02
SF3A1-203ENST00000444440 UCHL1P09936 223 aa8.65□□□□□ -1.02
SF3A1-203ENST00000444440 OPN1MW2P0DN77 364 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms