RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 ZNF728P0DKX0 622 aa13.93□□□□□ -0.18
PIKFYVE-206ENST00000443896 DVL1P1P54792 670 aaPredicted RBP13.93□□□□□ -0.18
PIKFYVE-206ENST00000443896 ZDHHC23Q8IYP9 409 aa13.93□□□□□ -0.18
PIKFYVE-206ENST00000443896 WDYHV1Q96HA8 205 aa13.93□□□□□ -0.18
PIKFYVE-206ENST00000443896 ZNF407Q9C0G0 2248 aa13.93□□□□□ -0.18
PIKFYVE-206ENST00000443896 TNRC6AQ8NDV7 1962 aaKnown RBP13.93□□□□□ -0.18
PIKFYVE-206ENST00000443896 TGIF2-C20orf24A0A0A6YYL0 155 aa13.93□□□□□ -0.18
PIKFYVE-206ENST00000443896 CNOT4O95628 575 aaKnown RBP13.93□□□□□ -0.18
PIKFYVE-206ENST00000443896 NGFP01138 241 aa13.93□□□□□ -0.18
PIKFYVE-206ENST00000443896 CXCL1P09341 107 aa13.93□□□□□ -0.18
PIKFYVE-206ENST00000443896 ZNF442Q9H7R0 627 aa13.93□□□□□ -0.18
PIKFYVE-206ENST00000443896 TUBA4BQ9H853 241 aa13.93□□□□□ -0.18
PIKFYVE-206ENST00000443896 PRSS50Q9UI38 385 aa13.93□□□□□ -0.18
PIKFYVE-206ENST00000443896 RCL1Q9Y2P8 373 aaKnown RBP13.93□□□□□ -0.18
PIKFYVE-206ENST00000443896 KPTNQ9Y664 436 aa13.93□□□□□ -0.18
PIKFYVE-206ENST00000443896 GPM6AP51674 278 aa13.92□□□□□ -0.18
PIKFYVE-206ENST00000443896 PLP2Q04941 152 aa13.92□□□□□ -0.18
PIKFYVE-206ENST00000443896 AKR1C8PQ5T2L2 129 aa13.92□□□□□ -0.18
PIKFYVE-206ENST00000443896 TOMM40LQ969M1 308 aa13.92□□□□□ -0.18
PIKFYVE-206ENST00000443896 GALNT14Q96FL9 552 aa13.92□□□□□ -0.18
PIKFYVE-206ENST00000443896 DEFB127Q9H1M4 99 aa13.92□□□□□ -0.18
PIKFYVE-206ENST00000443896 CYB5BO43169 146 aa13.92□□□□□ -0.18
PIKFYVE-206ENST00000443896 ZNF205O95201 554 aa13.92□□□□□ -0.18
PIKFYVE-206ENST00000443896 NPSP0C0P6 89 aa13.92□□□□□ -0.18
PIKFYVE-206ENST00000443896 BCL3P20749 454 aa13.92□□□□□ -0.18
PIKFYVE-206ENST00000443896 FCGR2CP31995 323 aa13.92□□□□□ -0.18
PIKFYVE-206ENST00000443896 RPS23P62266 143 aaKnown RBP13.92□□□□□ -0.18
PIKFYVE-206ENST00000443896 RNFT1Q5M7Z0 435 aa13.92□□□□□ -0.18
PIKFYVE-206ENST00000443896 OR2T2Q6IF00 324 aa13.92□□□□□ -0.18
PIKFYVE-206ENST00000443896 C17orf78Q8N4C9 275 aa13.92□□□□□ -0.18
PIKFYVE-206ENST00000443896 C2orf88Q9BSF0 95 aa13.92□□□□□ -0.18
PIKFYVE-206ENST00000443896 SPRR3Q9UBC9 169 aa13.92□□□□□ -0.18
PIKFYVE-206ENST00000443896 HIST1H2BKO60814 126 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 IL18BPO95998 194 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 HIST1H2BJP06899 126 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 HIST1H2BOP23527 126 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 HIST1H2BBP33778 126 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 SOX8P57073 446 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 HIST1H2BDP58876 126 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 HIST1H2BCP62807 126 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 NKX6-1P78426 367 aaPredicted RBP13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 SPEM2Q0P670 501 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 HIST2H2BEQ16778 126 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 IAH1Q2TAA2 248 aaPredicted RBP13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 ZNF766Q5HY98 468 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 BATF2Q8N1L9 274 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 HIST1H2BHQ93079 126 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 MOB3AQ96BX8 217 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 HIST1H2BNQ99877 126 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 HIST1H2BMQ99879 126 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 OPN3Q9H1Y3 402 aaPredicted RBP13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 NAA60Q9H7X0 242 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 TUBD1Q9UJT1 453 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 UCP3P55916 312 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 FGF12P61328 243 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 ARG2P78540 354 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 OR1K1Q8NGR3 316 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 ZDHHC11Q9H8X9 412 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 KCNIP3Q9Y2W7 256 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 CELSR3Q9NYQ7 3312 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 TRGV5A0A0B4J1U4 118 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 FAM157AC9JC47 383 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 GUK1Q16774 197 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 RTN4IP1Q8WWV3 396 aaPredicted RBP13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 CNTNAP3Q9BZ76 1288 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 C12orf49Q9H741 205 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 DNAJC13O75165 2243 aa13.91□□□□□ -0.18
PIKFYVE-206ENST00000443896 ZNF732B4DXR9 585 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 SCAF4O95104 1147 aaKnown RBP13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 PAX6P26367 422 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 IL2RGP31785 369 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 FXYD4P59646 89 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 TMEM187Q14656 261 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 ABCA11PQ4W5N1 156 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 GGNBP1Q5YKI7 109 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 OR5A2Q8NGI9 324 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 PACRGQ96M98 296 aaPredicted RBP13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 ZNF552Q9H707 407 aaPredicted RBP13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 ARHGAP21Q5T5U3 1957 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 CD300LBA8K4G0 201 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 IFNA21P01568 189 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 PRH1P02810 166 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 HIKESHIQ53FT3 197 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 FBXW9Q5XUX1 488 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 Q6ZS49 121 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 PIP4P1Q86T03 277 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 ZNF610Q8N9Z0 462 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 TMEM178AQ8NBL3 297 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 BCL2L2Q92843 193 aaPredicted RBP13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 EXTL1Q92935 676 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 MRPL24Q96A35 216 aaKnown RBP13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 SLC5A7Q9GZV3 580 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 GP6Q9HCN6 339 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 SLC2A9Q9NRM0 540 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 MTCH1Q9NZJ7 389 aa13.9□□□□□ -0.18
PIKFYVE-206ENST00000443896 OR5H1A6NKK0 313 aa13.89□□□□□ -0.19
PIKFYVE-206ENST00000443896 CD82P27701 267 aa13.89□□□□□ -0.19
PIKFYVE-206ENST00000443896 WNT5AP41221 380 aa13.89□□□□□ -0.19
PIKFYVE-206ENST00000443896 CLN3Q13286 438 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms