RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 DVL3Q92997 716 aaPredicted RBP6.89□□□□□ -1.31
CCDC39-201ENST00000442201 MICU1Q9BPX6 476 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 AUNIPQ9H7T9 357 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 NOP16Q9Y3C1 178 aaKnown RBP6.89□□□□□ -1.31
CCDC39-201ENST00000442201 FAM90A27PA6NNH2 459 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 CYB5AP00167 134 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 CD40P25942 277 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 APOBEC3AP31941 199 aaPredicted RBP6.89□□□□□ -1.31
CCDC39-201ENST00000442201 GLP1RP43220 463 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 KLF9Q13886 244 aaPredicted RBP6.89□□□□□ -1.31
CCDC39-201ENST00000442201 HAGHQ16775 308 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 ALKBH6Q3KRA9 238 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 FBXL19-AS1Q494R0 122 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 ASCL4Q6XD76 172 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 IL34Q6ZMJ4 242 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 SLC25A26Q70HW3 274 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 CALHM1Q8IU99 346 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 TOMM5Q8N4H5 51 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 OR56B1Q8NGI3 324 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 OR4A4PQ8NGN8 299 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 OR10R2Q8NGX6 335 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 OR51F2Q8NH61 342 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 RNASE8Q8TDE3 154 aaKnown RBP6.89□□□□□ -1.31
CCDC39-201ENST00000442201 YPEL4Q96NS1 127 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 NUDT16L1Q9BRJ7 211 aaKnown RBP6.89□□□□□ -1.31
CCDC39-201ENST00000442201 SELENOIQ9C0D9 397 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 PRO1933Q9H354 126 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 NGBQ9NPG2 151 aa6.89□□□□□ -1.31
CCDC39-201ENST00000442201 TIMM8AO60220 97 aaPredicted RBP6.88□□□□□ -1.31
CCDC39-201ENST00000442201 GTF2F2P13984 249 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 KITLGP21583 273 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 CPT2P23786 658 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 GLRXP35754 106 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 RPS23P62266 143 aaKnown RBP6.88□□□□□ -1.31
CCDC39-201ENST00000442201 ADORA2A-AS1P86434 159 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 ZNF345Q14585 488 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 CLINT1Q14677 625 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 MBNL2Q5VZF2 373 aaKnown RBP6.88□□□□□ -1.31
CCDC39-201ENST00000442201 ZNF573Q86YE8 665 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 OR8G5Q8NG78 346 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 OR51T1Q8NGJ9 327 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 NRIP2Q9BQI9 281 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 NICN1Q9BSH3 213 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 RTL8AQ9BWD3 113 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 FGF23Q9GZV9 251 aaPredicted RBP6.88□□□□□ -1.31
CCDC39-201ENST00000442201 ERRFI1Q9UJM3 462 aaPredicted RBP6.88□□□□□ -1.31
CCDC39-201ENST00000442201 FBXO7Q9Y3I1 522 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 SHANK1Q9Y566 2161 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 ELOA3CA0A087WX78 387 aaPredicted RBP6.88□□□□□ -1.31
CCDC39-201ENST00000442201 A0A0D9SG52 128 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 GGCTO75223 188 aaKnown RBP6.88□□□□□ -1.31
CCDC39-201ENST00000442201 YIF1AO95070 293 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 THBDP07204 575 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 SRP9P49458 86 aaKnown RBP6.88□□□□□ -1.31
CCDC39-201ENST00000442201 F2RL1P55085 397 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 AP3S2P59780 193 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 NKAPLQ5M9Q1 402 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 DMRTA1Q5VZB9 504 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 FAM89BQ8N5H3 189 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 NUDT10Q8NFP7 164 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 RNASE6Q93091 150 aaKnown RBP6.88□□□□□ -1.31
CCDC39-201ENST00000442201 CHIAQ9BZP6 476 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 ZMAT3Q9HA38 289 aaKnown RBP6.88□□□□□ -1.31
CCDC39-201ENST00000442201 IL36GQ9NZH8 169 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 KLK11Q9UBX7 282 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 FZR1Q9UM11 496 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 NBASA2RRP1 2371 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 IGKV1-12A0A0C4DH73 117 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.88□□□□□ -1.31
CCDC39-201ENST00000442201 TMEM238C9JI98 176 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 M0R143 59 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 IGKV1D-12P01611 117 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 SERPINF1P36955 418 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 NKX6-1P78426 367 aaPredicted RBP6.88□□□□□ -1.31
CCDC39-201ENST00000442201 SRSF3P84103 164 aaKnown RBP6.88□□□□□ -1.31
CCDC39-201ENST00000442201 DNM1P46Q6ZS02 220 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 MKXQ8IYA7 352 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 SAXO1Q8IYX7 474 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 WDR89Q96FK6 387 aaPredicted RBP6.88□□□□□ -1.31
CCDC39-201ENST00000442201 TM2D1Q9BX74 207 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 MMP26Q9NRE1 261 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 NKIRAS2Q9NYR9 191 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 DUSP13Q9UII6 198 aa6.88□□□□□ -1.31
CCDC39-201ENST00000442201 COL6A6A6NMZ7 2263 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 A0A0A6YYD4 124 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 TMEM235A6NFC5 223 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 SOCS1O15524 211 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 PMP2P02689 132 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 ZNF260Q3ZCT1 412 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 SCGB2B2Q4G0G5 96 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 ETFRF1Q6IPR1 90 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 VHLLQ6RSH7 139 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 SMIM15Q7Z3B0 74 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 OR5T1Q8NG75 326 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 PRR7Q8TB68 274 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 AQP3Q92482 292 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 WFIKKN1Q96NZ8 548 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 ZNF2Q9BSG1 426 aaPredicted RBP6.87□□□□□ -1.31
CCDC39-201ENST00000442201 CNTNAP3Q9BZ76 1288 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 KCNJ16Q9NPI9 418 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms