RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 PATZ1Q9HBE1 687 aaKnown RBP13.21□□□□□ -0.29
MCF2L-217ENST00000441756 TAF9BQ9HBM6 251 aa13.21□□□□□ -0.29
MCF2L-217ENST00000441756 CTSZQ9UBR2 303 aa13.21□□□□□ -0.29
MCF2L-217ENST00000441756 LINC00312Q9Y6C7 94 aa13.21□□□□□ -0.29
MCF2L-217ENST00000441756 HRNRQ86YZ3 2850 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-217ENST00000441756 IGKV1D-8A0A087WSZ0 117 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 A0A1B0GW55 424 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 A0A1W2PPH5 198 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 GSTT2P0CG29 244 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 DUX4L2P0CJ85 424 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 DUX4L3P0CJ86 424 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 DUX4L4P0CJ87 422 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 DUX4L5P0CJ88 424 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 DUX4L6P0CJ89 424 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 DUX4L7P0CJ90 424 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 OR5H8P0DN80 308 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 ECI1P42126 302 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 RFX2P48378 723 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 SEC61A1P61619 476 aaKnown RBP13.2□□□□□ -0.3
MCF2L-217ENST00000441756 RPL31P62899 125 aaKnown RBP13.2□□□□□ -0.3
MCF2L-217ENST00000441756 CR1LQ2VPA4 569 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 SCGB2B2Q4G0G5 96 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 FAAP20Q6NZ36 180 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 DUX4L9Q6RFH8 374 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-217ENST00000441756 NRARPQ7Z6K4 114 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 LRRC75A-AS1Q8N1F1 130 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 CENPSQ8N2Z9 138 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 TPRX1Q8N7U7 411 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 DUSP18Q8NEJ0 188 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 OR51S1Q8NGJ8 323 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 OR6F1Q8NGZ6 308 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 MRGPRDQ8TDS7 321 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 H1FXQ92522 213 aaKnown RBP13.2□□□□□ -0.3
MCF2L-217ENST00000441756 NINJ1Q92982 152 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 GALMQ96C23 342 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 RAB39BQ96DA2 213 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 SLC25A21Q9BQT8 299 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-217ENST00000441756 GAL3ST2Q9H3Q3 398 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 DUX4Q9UBX2 424 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 CLN8Q9UBY8 286 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 UBE2J1Q9Y385 318 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-217ENST00000441756 NUBP2Q9Y5Y2 271 aa13.2□□□□□ -0.3
MCF2L-217ENST00000441756 USP9YO00507 2555 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-217ENST00000441756 ZNF729A6NN14 1252 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-217ENST00000441756 F5H0A9 414 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-217ENST00000441756 HEXAP06865 529 aa13.19□□□□□ -0.3
MCF2L-217ENST00000441756 IL2RGP31785 369 aa13.19□□□□□ -0.3
MCF2L-217ENST00000441756 BTCP35070 178 aa13.19□□□□□ -0.3
MCF2L-217ENST00000441756 ESCO2Q56NI9 601 aa13.19□□□□□ -0.3
MCF2L-217ENST00000441756 Q6ZPA2 131 aa13.19□□□□□ -0.3
MCF2L-217ENST00000441756 IDO2Q6ZQW0 420 aa13.19□□□□□ -0.3
MCF2L-217ENST00000441756 OR4D10Q8NGI6 311 aa13.19□□□□□ -0.3
MCF2L-217ENST00000441756 OR13A1Q8NGR1 328 aa13.19□□□□□ -0.3
MCF2L-217ENST00000441756 OR10J5Q8NHC4 309 aa13.19□□□□□ -0.3
MCF2L-217ENST00000441756 C10orf105Q8TEF2 133 aa13.19□□□□□ -0.3
MCF2L-217ENST00000441756 NRGNQ92686 78 aa13.19□□□□□ -0.3
MCF2L-217ENST00000441756 CORO2AQ92828 525 aa13.19□□□□□ -0.3
MCF2L-217ENST00000441756 SCGB3A2Q96PL1 93 aa13.19□□□□□ -0.3
MCF2L-217ENST00000441756 SLC6A7Q99884 636 aa13.19□□□□□ -0.3
MCF2L-217ENST00000441756 GINS4Q9BRT9 223 aa13.19□□□□□ -0.3
MCF2L-217ENST00000441756 TAS2R3Q9NYW6 316 aa13.19□□□□□ -0.3
MCF2L-217ENST00000441756 C12orf77C9JDV5 145 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 NPIPB11E5RHQ5 1161 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 BET1O15155 118 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 HSPA12AO43301 675 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 NDUFB6O95139 128 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 HBZP02008 142 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 TCRBP04435 133 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 WNT2P09544 360 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 SCTP09683 121 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 ZNF735P0CB33 412 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 HERV-K104P61576 105 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 GNB2P62879 340 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 DEFB113Q30KQ7 82 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 PLA1AQ53H76 456 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 CD276Q5ZPR3 534 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 PRR18Q8N4B5 295 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 IL1F10Q8WWZ1 152 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 ARL11Q969Q4 196 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 CREB3L1Q96BA8 519 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 MBD6Q96DN6 1003 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 KIRREL1Q96J84 757 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 BPESC1Q9GZL8 116 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 OCEL1Q9H607 264 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 CALYQ9NYX4 217 aa13.18□□□□□ -0.3
MCF2L-217ENST00000441756 COL12A1Q99715 3063 aa13.17□□□□□ -0.3
MCF2L-217ENST00000441756 TRBV6-7A0A0A0MS04 114 aa13.17□□□□□ -0.3
MCF2L-217ENST00000441756 SDCBPO00560 298 aaPredicted RBP13.17□□□□□ -0.3
MCF2L-217ENST00000441756 SLC25A16P16260 332 aa13.17□□□□□ -0.3
MCF2L-217ENST00000441756 ZBTB25P24278 435 aa13.17□□□□□ -0.3
MCF2L-217ENST00000441756 CCR6P51684 374 aa13.17□□□□□ -0.3
MCF2L-217ENST00000441756 HTD2P86397 168 aa13.17□□□□□ -0.3
MCF2L-217ENST00000441756 SURF2Q15527 256 aaPredicted RBP13.17□□□□□ -0.3
MCF2L-217ENST00000441756 IGSF11Q5DX21 431 aa13.17□□□□□ -0.3
MCF2L-217ENST00000441756 WDR25Q64LD2 544 aaPredicted RBP13.17□□□□□ -0.3
MCF2L-217ENST00000441756 CCBE1Q6UXH8 406 aaPredicted RBP13.17□□□□□ -0.3
MCF2L-217ENST00000441756 BTN2A1Q7KYR7 527 aa13.17□□□□□ -0.3
MCF2L-217ENST00000441756 FAM185AQ8N0U4 392 aa13.17□□□□□ -0.3
MCF2L-217ENST00000441756 OR10A7Q8NGE5 316 aa13.17□□□□□ -0.3
MCF2L-217ENST00000441756 TERB2Q8NHR7 220 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms