RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 ZNF880Q6PDB4 577 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 LIAT1Q6ZQX7 453 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 SSX8Q7RTT4 187 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 HSD17B13Q7Z5P4 300 aaPredicted RBP7.77□□□□□ -1.17
HDAC6-209ENST00000440653 ZNF565Q8N9K5 539 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 BHLHE23Q8NDY6 225 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 ITLN2Q8WWU7 325 aaPredicted RBP7.77□□□□□ -1.17
HDAC6-209ENST00000440653 IL22RA2Q969J5 263 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 SFXN3Q9BWM7 321 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 SHARPINQ9H0F6 387 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 DNTTIP1Q9H147 329 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 WDR13Q9H1Z4 485 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 RASL12Q9NYN1 266 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 GLS2Q9UI32 602 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 PCDHB10Q9UN67 800 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 TMED3Q9Y3Q3 217 aa7.77□□□□□ -1.17
HDAC6-209ENST00000440653 NUDT19A8MXV4 375 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 F5H0A9 414 aaPredicted RBP7.76□□□□□ -1.17
HDAC6-209ENST00000440653 C19orf84I3L1E1 186 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 GPR31O00270 319 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 SYNGR1O43759 233 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 ADAP1O75689 374 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 TUSC2O75896 110 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 CDS2O95674 445 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 AADACP22760 399 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 CA6P23280 308 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 IL32P24001 234 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 DUSP1P28562 367 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 UCP2P55851 309 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 FXYD4P59646 89 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 RPS23P62266 143 aaKnown RBP7.76□□□□□ -1.17
HDAC6-209ENST00000440653 IL15RAQ13261 267 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 SNTB1Q13884 538 aaKnown RBP7.76□□□□□ -1.17
HDAC6-209ENST00000440653 TMEM187Q14656 261 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 ATXN7L3Q14CW9 347 aaPredicted RBP7.76□□□□□ -1.17
HDAC6-209ENST00000440653 OR8G1Q15617 311 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 IAH1Q2TAA2 248 aaPredicted RBP7.76□□□□□ -1.17
HDAC6-209ENST00000440653 C1orf185Q5T7R7 199 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 MBNL2Q5VZF2 373 aaKnown RBP7.76□□□□□ -1.17
HDAC6-209ENST00000440653 VWA1Q6PCB0 445 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 ALKAL2Q6UX46 152 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 BHLHA15Q7RTS1 189 aaPredicted RBP7.76□□□□□ -1.17
HDAC6-209ENST00000440653 CMTM1Q8IZ96 169 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 EIF4E3Q8N5X7 224 aaKnown RBP7.76□□□□□ -1.17
HDAC6-209ENST00000440653 SUMF2Q8NBJ7 301 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 OR5T2Q8NGG2 359 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 OR1J1Q8NGS3 322 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 SLC25A40Q8TBP6 338 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 MRPL30Q8TCC3 161 aaKnown RBP7.76□□□□□ -1.17
HDAC6-209ENST00000440653 FAM216AQ8WUB2 273 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 DYRK2Q92630 601 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 RBPMSQ93062 196 aaKnown RBP7.76□□□□□ -1.17
HDAC6-209ENST00000440653 MARS2Q96GW9 593 aaKnown RBP7.76□□□□□ -1.17
HDAC6-209ENST00000440653 SEC22AQ96IW7 307 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 KIRREL1Q96J84 757 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 USB1Q9BQ65 265 aaKnown RBP7.76□□□□□ -1.17
HDAC6-209ENST00000440653 NRIP2Q9BQI9 281 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 OR2J1Q9GZK6 312 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 TLNRD1Q9H1K6 362 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 CXXC4Q9H2H0 198 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 PLEKHA2Q9HB19 425 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 CRIM1Q9NZV1 1036 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 NUP50Q9UKX7 468 aa7.76□□□□□ -1.17
HDAC6-209ENST00000440653 A0A1B0GWJ7 208 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 MFSD2BA6NFX1 497 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 OR5H1A6NKK0 313 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 KRBOX1C9JBD0 128 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 H0Y980 276 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 I3L521 148 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 SHOXO15266 292 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 DEDDO75618 318 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 TNFSF13O75888 250 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 NXPH2O95156 264 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 GAPDHP04406 335 aaKnown RBP7.75□□□□□ -1.17
HDAC6-209ENST00000440653 CELA3BP08861 270 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 HOXB5P09067 269 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 OR5AC1P0C628 307 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 ZNF44P15621 663 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 GCH1P30793 250 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 TIMP3P35625 211 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 P2RX3P56373 397 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 S100A10P60903 97 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 ERVK11-1P61568 191 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 TLE4Q04727 773 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 ZNF146Q15072 292 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 AANATQ16613 207 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 KRTCAP3Q53RY4 240 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 PAN3Q58A45 887 aaKnown RBP7.75□□□□□ -1.17
HDAC6-209ENST00000440653 GGNBP1Q5YKI7 109 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 FAM180AQ6UWF9 173 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 GAPTQ8N292 157 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 FAM71E2Q8N5Q1 922 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 ST6GALNAC3Q8NDV1 305 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 OR8G5Q8NG78 346 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 LILRB1Q8NHL6 650 aaPredicted RBP7.75□□□□□ -1.17
HDAC6-209ENST00000440653 TAAR6Q96RI8 345 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 HES4Q9HCC6 221 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 SDHAF2Q9NX18 166 aa7.75□□□□□ -1.17
HDAC6-209ENST00000440653 PURGQ9UJV8 347 aaKnown RBP7.75□□□□□ -1.17
HDAC6-209ENST00000440653 SPEF1Q9Y4P9 236 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms