RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 SPSB3Q6PJ21 355 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 PCSK4Q6UW60 755 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 APOBEC3DQ96AK3 386 aaPredicted RBP11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 TAAR3PQ9P1P4 343 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 PPP1R3CQ9UQK1 317 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 ATP23Q9Y6H3 246 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 TRAV24A0A0B4J272 114 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 IGHEP01854 428 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 VDAC1P21796 283 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 RAB5CP51148 216 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 TLE1Q04724 770 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 SLC25A24Q6NUK1 477 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 Q6ZRM9 215 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 PLPPR1Q8TBJ4 325 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 FAM173AQ9BQD7 235 aa11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 RBM7Q9Y580 266 aaKnown RBP11.56□□□□□ -0.56
HERPUD1-204ENST00000439977 KIAA2026Q5HYC2 2103 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 IAPPP10997 89 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 WNT5AP41221 380 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 ZNF343Q6P1L6 599 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 THNSL2Q86YJ6 484 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 UBALD2Q8IYN6 164 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 TMEM251Q8N6I4 163 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 OR1J1Q8NGS3 322 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 MRPL30Q8TCC3 161 aaKnown RBP11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 TECTBQ96PL2 329 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 A0A1W2PNU3 283 aaPredicted RBP11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 C5orf52A6NGY3 159 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 B4E171 279 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 TXNL1O43396 289 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 OR2C1O95371 312 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 CNOT4O95628 575 aaKnown RBP11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 SERPINE2P07093 398 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 TSPAN7P41732 249 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 PAX9P55771 341 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 SRPXP78539 464 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 ESPL1Q14674 2120 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 ZNF561Q8N587 486 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 COMMD1Q8N668 190 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 CYB561D1Q8N8Q1 229 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 OR10J5Q8NHC4 309 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 POM121L2Q96KW2 1035 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 SPIN2AQ99865 258 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 SPIN2BQ9BPZ2 258 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 EGLN1Q9GZT9 426 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 DEFB127Q9H1M4 99 aa11.55□□□□□ -0.56
HERPUD1-204ENST00000439977 KIR2DS1A0A191URI9 304 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 SIRPB1O00241 398 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 PITX3O75364 302 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 UCP1P25874 307 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 KIR2DS4P43632 304 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 RPS23P62266 143 aaKnown RBP11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 ID3Q02535 119 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 PLP2Q04941 152 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 KIR2DS1Q14954 304 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 NCMAPQ5T1S8 102 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 C1orf210Q8IVY1 113 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 FAM185AQ8N0U4 392 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 OR1K1Q8NGR3 316 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 TMEM45BQ96B21 275 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 GPR146Q96CH1 333 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 RSG1Q9BU20 258 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 SLC25A31Q9H0C2 315 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 IGKV3D-15A0A087WSY6 115 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 ANKRD30BLA7E2S9 258 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 H3BQ15 152 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 HSPA12AO43301 675 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 TUSC2O75896 110 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 F2RP25116 425 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 LMO1P25800 156 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 MCEMP1Q8IX19 187 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 ARRDC1-AS1Q9H2J1 176 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 IL17BQ9UHF5 180 aa11.54□□□□□ -0.56
HERPUD1-204ENST00000439977 FOLR2P14207 255 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 AGAP20933 346 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 HOXA6P31267 233 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 RPS10P46783 165 aaKnown RBP11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 AKR1C8PQ5T2L2 129 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 ATP1A1-AS1Q5TC04 95 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 FAM53AQ6NSI3 398 aaPredicted RBP11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 FAM58AQ8N1B3 248 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 Q8NFD4 153 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 OR5P3Q8WZ94 311 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 DLL3Q9NYJ7 618 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 B4GALT7Q9UBV7 327 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 CACNA1DQ01668 2161 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 WDR1O75083 606 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 IFNA4P05014 189 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 ERVS71-1P61550 626 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 OR5A2Q8NGI9 324 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 RAB39BQ96DA2 213 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 PRO3102Q9H379 93 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 KCNS2Q9ULS6 477 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 PRR14LQ5THK1 2151 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 MT-CO3P00414 261 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 CELA3BP08861 270 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 METTL15P1P0C7V9 234 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 TAGLN2P37802 199 aaKnown RBP11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 VSIRQ9H7M9 311 aa11.53□□□□□ -0.56
HERPUD1-204ENST00000439977 NIT2Q9NQR4 276 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms