RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 OPN1MWP04001 364 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 OPN1MW2P0DN77 364 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 OPN1MW3P0DN78 364 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 EPHA1P21709 976 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 FAM69BQ5VUD6 431 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 CYB5R2Q6BCY4 276 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 RHBDD2Q6NTF9 364 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 ZNF880Q6PDB4 577 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 TP53RKQ96S44 253 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 LYRM2Q9NU23 88 aaPredicted RBP7.38□□□□□ -1.23
HPS4-206ENST00000439453 GNG13Q9P2W3 67 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 IL17BQ9UHF5 180 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 VDAC3Q9Y277 283 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 RTTNQ86VV8 2226 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 MED13Q9UHV7 2174 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 ANKUB1A6NFN9 424 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 SSSCA1O60232 199 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 CST7O76096 145 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 CDS2O95674 445 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 IGHG1P01857 330 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 PGA3P0DJD8 388 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 DTYMKP23919 212 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 GUCA1AP43080 201 aaPredicted RBP7.38□□□□□ -1.23
HPS4-206ENST00000439453 FOXL2P58012 376 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 GRB2P62993 217 aaKnown RBP7.38□□□□□ -1.23
HPS4-206ENST00000439453 VAMP2P63027 116 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 SLC25A47Q6Q0C1 308 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 UEVLDQ8IX04 471 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 CCDC71LQ8N9Z2 235 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 OR10A7Q8NGE5 316 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 CT55Q8WUE5 264 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 MAGT1Q9H0U3 335 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 ZNF581Q9P0T4 197 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 COPS7AQ9UBW8 275 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 CHD6Q8TD26 2715 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 A0A1W2PNV4 684 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 TRDCB7Z8K6 153 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 SHISA8B8ZZ34 492 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 DFFBO76075 338 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 GCGP01275 180 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 SFTPCP11686 197 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 COL10A1Q03692 680 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 ABLIM2Q6H8Q1 611 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 DPPA3Q6W0C5 159 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 TMEM217Q8N7C4 229 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 HIPK2Q9H2X6 1198 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 SHANK1Q9Y566 2161 aa7.38□□□□□ -1.23
HPS4-206ENST00000439453 KLK10O43240 276 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 DHRS3O75911 302 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 IGLV3-1P01715 115 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 C6orf15Q6UXA7 325 aaPredicted RBP7.37□□□□□ -1.23
HPS4-206ENST00000439453 LANCL3Q6ZV70 420 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 C17orf78Q8N4C9 275 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 DYRK2Q92630 601 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 MOB3AQ96BX8 217 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 METTL9Q9H1A3 318 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 SDF2L1Q9HCN8 221 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 PIGLQ9Y2B2 252 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 V9GYS6 101 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 DOCK10Q96BY6 2186 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 NCOA6Q14686 2063 aaPredicted RBP7.37□□□□□ -1.23
HPS4-206ENST00000439453 K7ENP7 123 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 UCP3P55916 312 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 NKAIN1Q4KMZ8 207 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 MRPL14Q6P1L8 145 aaKnown RBP7.37□□□□□ -1.23
HPS4-206ENST00000439453 INO80CQ6PI98 192 aaPredicted RBP7.37□□□□□ -1.23
HPS4-206ENST00000439453 ODF3L1Q8IXM7 274 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 ZNF100Q8IYN0 542 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 ZNF441Q8N8Z8 693 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 PP6455Q8WZ26 134 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 SRD5A3Q9H8P0 318 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 CISD1Q9NZ45 108 aaKnown RBP7.37□□□□□ -1.23
HPS4-206ENST00000439453 TRAV1-1A0A0B4J248 108 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 VSTM2BA6NLU5 285 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 KLF7O75840 302 aaPredicted RBP7.37□□□□□ -1.23
HPS4-206ENST00000439453 MBP02144 154 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 IDH3GP51553 393 aaPredicted RBP7.37□□□□□ -1.23
HPS4-206ENST00000439453 NSDHLQ15738 373 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 CXorf66Q5JRM2 361 aaPredicted RBP7.37□□□□□ -1.23
HPS4-206ENST00000439453 C20orf196Q8IYI0 205 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 PRSS58Q8IYP2 241 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 OR1N1Q8NGS0 311 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 SNHG12Q9BXW3 62 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 CTDSP1Q9GZU7 261 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 ZNF160Q9HCG1 818 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 CBY1Q9Y3M2 126 aa7.37□□□□□ -1.23
HPS4-206ENST00000439453 C3orf85A0A1B0GTC6 90 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 XKRY2A2RUG3 117 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 ZFP92A6NM28 416 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 ANGPTL7O43827 346 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 HERV-K104P61576 105 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 RPS18P62269 152 aaKnown RBP7.36□□□□□ -1.23
HPS4-206ENST00000439453 COA6Q5JTJ3 125 aaKnown RBP7.36□□□□□ -1.23
HPS4-206ENST00000439453 TMEM164Q5U3C3 297 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 HIST1H2AAQ96QV6 131 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 LRFN1Q9P244 771 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 GAB2Q9UQC2 676 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 F5H5K5 113 aa7.36□□□□□ -1.23
HPS4-206ENST00000439453 MPPED1O15442 326 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms