RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 TMEM267Q0VDI3 215 aaPredicted RBP13.13□□□□□ -0.31
APP-208ENST00000439274 FOXO1Q12778 655 aa13.13□□□□□ -0.31
APP-208ENST00000439274 CEACAM21Q3KPI0 293 aa13.13□□□□□ -0.31
APP-208ENST00000439274 RDH5Q92781 318 aa13.13□□□□□ -0.31
APP-208ENST00000439274 OR51B6Q9H340 312 aa13.13□□□□□ -0.31
APP-208ENST00000439274 RNF115Q9Y4L5 304 aa13.13□□□□□ -0.31
APP-208ENST00000439274 ATP23Q9Y6H3 246 aa13.13□□□□□ -0.31
APP-208ENST00000439274 DOCK10Q96BY6 2186 aa13.13□□□□□ -0.31
APP-208ENST00000439274 CLEC18AA5D8T8 446 aa13.13□□□□□ -0.31
APP-208ENST00000439274 SCAF4O95104 1147 aaKnown RBP13.13□□□□□ -0.31
APP-208ENST00000439274 SLC34A2O95436 690 aa13.13□□□□□ -0.31
APP-208ENST00000439274 UBE2KP61086 200 aa13.13□□□□□ -0.31
APP-208ENST00000439274 TRA2AQ13595 282 aaKnown RBP eCLIP13.13□□□□□ -0.313e-10■■■■□ 21.8
APP-208ENST00000439274 AKR1C8PQ5T2L2 129 aa13.13□□□□□ -0.31
APP-208ENST00000439274 PCSK4Q6UW60 755 aa13.13□□□□□ -0.31
APP-208ENST00000439274 C17orf78Q8N4C9 275 aa13.13□□□□□ -0.31
APP-208ENST00000439274 CLEC18CQ8NCF0 446 aa13.13□□□□□ -0.31
APP-208ENST00000439274 MRPL30Q8TCC3 161 aaKnown RBP13.13□□□□□ -0.31
APP-208ENST00000439274 HES7Q9BYE0 225 aa13.13□□□□□ -0.31
APP-208ENST00000439274 YIF1AO95070 293 aa13.12□□□□□ -0.31
APP-208ENST00000439274 IFNA17P01571 189 aa13.12□□□□□ -0.31
APP-208ENST00000439274 DLK1P80370 383 aa13.12□□□□□ -0.31
APP-208ENST00000439274 SP5Q6BEB4 398 aaPredicted RBP13.12□□□□□ -0.31
APP-208ENST00000439274 ZNF429Q86V71 674 aa13.12□□□□□ -0.31
APP-208ENST00000439274 CMTM1Q8IZ96 169 aa13.12□□□□□ -0.31
APP-208ENST00000439274 ZNF295-AS1Q8N0V1 137 aa13.12□□□□□ -0.31
APP-208ENST00000439274 MIOXQ9UGB7 285 aa13.12□□□□□ -0.31
APP-208ENST00000439274 R4GN57 208 aa13.12□□□□□ -0.31
APP-208ENST00000439274 DOCK7Q96N67 2140 aa13.12□□□□□ -0.31
APP-208ENST00000439274 TRAV39A0A0B4J263 110 aa13.12□□□□□ -0.31
APP-208ENST00000439274 KIR2DS1A0A191URI9 304 aa13.12□□□□□ -0.31
APP-208ENST00000439274 PPIHO43447 177 aaKnown RBP13.12□□□□□ -0.31
APP-208ENST00000439274 LAMTOR5O43504 91 aa13.12□□□□□ -0.31
APP-208ENST00000439274 CXCL1P09341 107 aa13.12□□□□□ -0.31
APP-208ENST00000439274 MAS1LP35410 378 aa13.12□□□□□ -0.31
APP-208ENST00000439274 EIF2S3P41091 472 aaKnown RBP13.12□□□□□ -0.31
APP-208ENST00000439274 KIR2DS4P43632 304 aa13.12□□□□□ -0.31
APP-208ENST00000439274 KIR2DS1Q14954 304 aa13.12□□□□□ -0.31
APP-208ENST00000439274 TIPARPQ7Z3E1 657 aaKnown RBP13.12□□□□□ -0.31
APP-208ENST00000439274 MKXQ8IYA7 352 aa13.12□□□□□ -0.31
APP-208ENST00000439274 OR5D13Q8NGL4 314 aa13.12□□□□□ -0.31
APP-208ENST00000439274 CT55Q8WUE5 264 aa13.12□□□□□ -0.31
APP-208ENST00000439274 TCTEX1D2Q8WW35 142 aa13.12□□□□□ -0.31
APP-208ENST00000439274 TMEM45BQ96B21 275 aa13.12□□□□□ -0.31
APP-208ENST00000439274 GPR146Q96CH1 333 aa13.12□□□□□ -0.31
APP-208ENST00000439274 GNPNAT1Q96EK6 184 aaPredicted RBP13.12□□□□□ -0.31
APP-208ENST00000439274 ATP5SQ99766 215 aa13.12□□□□□ -0.31
APP-208ENST00000439274 SMDT1Q9H4I9 107 aa13.12□□□□□ -0.31
APP-208ENST00000439274 ARGFXA6NJG6 315 aa13.11□□□□□ -0.31
APP-208ENST00000439274 H0Y980 276 aa13.11□□□□□ -0.31
APP-208ENST00000439274 PSG2P11465 335 aa13.11□□□□□ -0.31
APP-208ENST00000439274 BAXQ07812 192 aa13.11□□□□□ -0.31
APP-208ENST00000439274 KIAA0141Q14154 515 aaPredicted RBP13.11□□□□□ -0.31
APP-208ENST00000439274 THNSL2Q86YJ6 484 aa13.11□□□□□ -0.31
APP-208ENST00000439274 TMEM105Q8N8V8 129 aa13.11□□□□□ -0.31
APP-208ENST00000439274 OR8G5Q8NG78 346 aa13.11□□□□□ -0.31
APP-208ENST00000439274 CLDND2Q8NHS1 167 aa13.11□□□□□ -0.31
APP-208ENST00000439274 Q8WTZ3 238 aa13.11□□□□□ -0.31
APP-208ENST00000439274 PSMF1Q92530 271 aa13.11□□□□□ -0.31
APP-208ENST00000439274 ABHD14BQ96IU4 210 aa13.11□□□□□ -0.31
APP-208ENST00000439274 LRFN1Q9P244 771 aa13.11□□□□□ -0.31
APP-208ENST00000439274 WSB1Q9Y6I7 421 aa13.11□□□□□ -0.31
APP-208ENST00000439274 FAM186AA6NE01 2351 aa13.11□□□□□ -0.31
APP-208ENST00000439274 F2RP25116 425 aa13.11□□□□□ -0.31
APP-208ENST00000439274 SRSF7Q16629 238 aaKnown RBP eCLIP13.11□□□□□ -0.31
APP-208ENST00000439274 MPV17LQ2QL34 196 aa13.11□□□□□ -0.31
APP-208ENST00000439274 Q6ZRM9 215 aa13.11□□□□□ -0.31
APP-208ENST00000439274 C1orf210Q8IVY1 113 aa13.11□□□□□ -0.31
APP-208ENST00000439274 SAXO1Q8IYX7 474 aa13.11□□□□□ -0.31
APP-208ENST00000439274 IL1F10Q8WWZ1 152 aa13.11□□□□□ -0.31
APP-208ENST00000439274 SMOC1Q9H4F8 434 aa13.11□□□□□ -0.31
APP-208ENST00000439274 TRAV24A0A0B4J272 114 aa13.1□□□□□ -0.31
APP-208ENST00000439274 TRAV20A0A0B4J274 112 aa13.1□□□□□ -0.31
APP-208ENST00000439274 DUXBA0A1W2PPF3 345 aa13.1□□□□□ -0.31
APP-208ENST00000439274 BTBD17A6NE02 478 aa13.1□□□□□ -0.31
APP-208ENST00000439274 JMJD7P0C870 316 aa13.1□□□□□ -0.31
APP-208ENST00000439274 RPL23AP62750 156 aaKnown RBP13.1□□□□□ -0.31
APP-208ENST00000439274 ZNF506Q5JVG8 444 aa13.1□□□□□ -0.31
APP-208ENST00000439274 UBALD1Q8TB05 177 aa13.1□□□□□ -0.31
APP-208ENST00000439274 TCEAL7Q9BRU2 100 aa13.1□□□□□ -0.31
APP-208ENST00000439274 OR1A1Q9P1Q5 309 aa13.1□□□□□ -0.31
APP-208ENST00000439274 ERRFI1Q9UJM3 462 aaPredicted RBP13.1□□□□□ -0.31
APP-208ENST00000439274 TGIF2-C20orf24A0A0A6YYL0 155 aa13.1□□□□□ -0.31
APP-208ENST00000439274 FAM166BA8MTA8 275 aa13.1□□□□□ -0.31
APP-208ENST00000439274 LHX2P50458 406 aa13.1□□□□□ -0.31
APP-208ENST00000439274 TAS2R30P59541 319 aa13.1□□□□□ -0.31
APP-208ENST00000439274 ERVFRD-1P60508 538 aa13.1□□□□□ -0.31
APP-208ENST00000439274 ELOBQ15370 118 aa13.1□□□□□ -0.31
APP-208ENST00000439274 ZNF324BQ6AW86 544 aaPredicted RBP13.1□□□□□ -0.31
APP-208ENST00000439274 MYPOPQ86VE0 399 aaPredicted RBP13.1□□□□□ -0.31
APP-208ENST00000439274 C1QL4Q86Z23 238 aa13.1□□□□□ -0.31
APP-208ENST00000439274 APOBEC3DQ96AK3 386 aaPredicted RBP13.1□□□□□ -0.31
APP-208ENST00000439274 RSG1Q9BU20 258 aa13.1□□□□□ -0.31
APP-208ENST00000439274 IGKV3D-15A0A087WSY6 115 aa13.09□□□□□ -0.31
APP-208ENST00000439274 CD300LBA8K4G0 201 aa13.09□□□□□ -0.31
APP-208ENST00000439274 IGHEP01854 428 aa13.09□□□□□ -0.31
APP-208ENST00000439274 DUSP3P51452 185 aaPredicted RBP13.09□□□□□ -0.31
APP-208ENST00000439274 IL24Q13007 206 aa13.09□□□□□ -0.31
APP-208ENST00000439274 ZNF674Q2M3X9 581 aa13.09□□□□□ -0.31
APP-208ENST00000439274 NRN1LQ496H8 165 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms