RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 CA5BP1Q8WTZ4 195 aa6.4□□□□□ -1.38
HMGB2-202ENST00000438704 LRRC29Q8WV35 223 aa6.4□□□□□ -1.38
HMGB2-202ENST00000438704 DYRK2Q92630 601 aa6.4□□□□□ -1.38
HMGB2-202ENST00000438704 PIK3IP1Q96FE7 263 aa6.4□□□□□ -1.38
HMGB2-202ENST00000438704 OR2V2Q96R30 315 aa6.4□□□□□ -1.38
HMGB2-202ENST00000438704 SYT3Q9BQG1 590 aa6.4□□□□□ -1.38
HMGB2-202ENST00000438704 SEC22CQ9BRL7 303 aa6.4□□□□□ -1.38
HMGB2-202ENST00000438704 RTBDNQ9BSG5 229 aaPredicted RBP6.4□□□□□ -1.38
HMGB2-202ENST00000438704 WDR13Q9H1Z4 485 aa6.4□□□□□ -1.38
HMGB2-202ENST00000438704 RANGRFQ9HD47 186 aaPredicted RBP6.4□□□□□ -1.38
HMGB2-202ENST00000438704 AP5S1Q9NUS5 200 aa6.4□□□□□ -1.38
HMGB2-202ENST00000438704 C1orf123Q9NWV4 160 aa6.4□□□□□ -1.38
HMGB2-202ENST00000438704 ZNF222Q9UK12 451 aa6.4□□□□□ -1.38
HMGB2-202ENST00000438704 FZR1Q9UM11 496 aa6.4□□□□□ -1.38
HMGB2-202ENST00000438704 CACNA1BQ00975 2339 aa6.4□□□□□ -1.38
HMGB2-202ENST00000438704 CHD3Q12873 2000 aaKnown RBP6.4□□□□□ -1.39
HMGB2-202ENST00000438704 PKDREJQ9NTG1 2253 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 TRBV6-7A0A0A0MS04 114 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 C9orf170A2RU37 121 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 FAM90A27PA6NNH2 459 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 DEFB108AA8MXU0 73 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 B9A039 149 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 E7EQL1 145 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 M0R233 179 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 SSNA1O43805 119 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 ZNF737O75373 536 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 GOSR1O95249 250 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 SFT2D2O95562 160 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 TK1P04183 234 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 GSTT2P0CG29 244 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 ZNF44P15621 663 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 MUC1P15941 1255 aaPredicted RBP6.39□□□□□ -1.39
HMGB2-202ENST00000438704 TNFRSF1AP19438 455 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 CXCL3P19876 107 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 DUSP1P28562 367 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 GLP1RP43220 463 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 EIF2B2P49770 351 aaKnown RBP6.39□□□□□ -1.39
HMGB2-202ENST00000438704 RAP2BP61225 183 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 RND3P61587 244 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 HLA-DRB3P79483 266 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 TNFAIP6P98066 277 aaPredicted RBP6.39□□□□□ -1.39
HMGB2-202ENST00000438704 CBX3Q13185 183 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 HMGN3Q15651 99 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 MSMO1Q15800 293 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 KCNJ8Q15842 424 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 IGFBP7Q16270 282 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 MST1LQ2TV78 715 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 ZFP69Q49AA0 526 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 C4orf46Q504U0 113 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 TEX36Q5VZQ5 186 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 TRAT1Q6PIZ9 186 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 C17orf107Q6ZR85 190 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 ZNF826PQ6ZT77 177 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 NOXA1Q86UR1 476 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 FAM185AQ8N0U4 392 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 C12orf45Q8N5I9 185 aaPredicted RBP6.39□□□□□ -1.39
HMGB2-202ENST00000438704 OR2AK2Q8NG84 335 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 PPP1R35Q8TAP8 253 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 MARCH1Q8TCQ1 289 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 ITLN1Q8WWA0 313 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 CAPSLQ8WWF8 208 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 ITLN2Q8WWU7 325 aaPredicted RBP6.39□□□□□ -1.39
HMGB2-202ENST00000438704 RDH5Q92781 318 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 TMEM230Q96A57 120 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 GALNT14Q96FL9 552 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 SDSLQ96GA7 329 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 SNX22Q96L94 193 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 HYLS1Q96M11 299 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 FYTTD1Q96QD9 318 aaKnown RBP6.39□□□□□ -1.39
HMGB2-202ENST00000438704 JMJD8Q96S16 334 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 ZNF2Q9BSG1 426 aaPredicted RBP6.39□□□□□ -1.39
HMGB2-202ENST00000438704 ZNF436Q9C0F3 470 aaPredicted RBP6.39□□□□□ -1.39
HMGB2-202ENST00000438704 FAM234AQ9H0X4 552 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 DNTTIP1Q9H147 329 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 MS4A5Q9H3V2 200 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 LIME1Q9H400 295 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 RANBP3Q9H6Z4 567 aaPredicted RBP6.39□□□□□ -1.39
HMGB2-202ENST00000438704 DLL4Q9NR61 685 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 PIPOXQ9P0Z9 390 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 RNF7Q9UBF6 113 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 RNF115Q9Y4L5 304 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 ARFGEF3Q5TH69 2177 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 ITPR1Q14643 2758 aa6.39□□□□□ -1.39
HMGB2-202ENST00000438704 IGKV1D-17A0A075B6S4 117 aa6.38□□□□□ -1.39
HMGB2-202ENST00000438704 IGKV1-6A0A0C4DH72 117 aa6.38□□□□□ -1.39
HMGB2-202ENST00000438704 TMEM30CPA0ZSE6 113 aa6.38□□□□□ -1.39
HMGB2-202ENST00000438704 NKX2-6A6NCS4 301 aa6.38□□□□□ -1.39
HMGB2-202ENST00000438704 TUBAL3A6NHL2 446 aa6.38□□□□□ -1.39
HMGB2-202ENST00000438704 RFPL4AA6NLU0 287 aa6.38□□□□□ -1.39
HMGB2-202ENST00000438704 RFPL4AL1F8VTS6 287 aa6.38□□□□□ -1.39
HMGB2-202ENST00000438704 SDCBPO00560 298 aaPredicted RBP6.38□□□□□ -1.39
HMGB2-202ENST00000438704 HS3ST1O14792 307 aa6.38□□□□□ -1.39
HMGB2-202ENST00000438704 WNT9BO14905 357 aa6.38□□□□□ -1.39
HMGB2-202ENST00000438704 SPRY3O43610 288 aa6.38□□□□□ -1.39
HMGB2-202ENST00000438704 CLDN14O95500 239 aa6.38□□□□□ -1.39
HMGB2-202ENST00000438704 PPYP01298 95 aa6.38□□□□□ -1.39
HMGB2-202ENST00000438704 PSG2P11465 335 aa6.38□□□□□ -1.39
HMGB2-202ENST00000438704 IGFBP2P18065 325 aa6.38□□□□□ -1.39
HMGB2-202ENST00000438704 PRDX2P32119 198 aa6.38□□□□□ -1.39
HMGB2-202ENST00000438704 OR3A1P47881 315 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms