RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 FAM234AQ9H0X4 552 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 DNTTIP1Q9H147 329 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 RIMS4Q9H426 269 aaPredicted RBP5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 Q9N2K0 584 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 MYOZ1Q9NP98 299 aaPredicted RBP5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 ING3Q9NXR8 418 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 TAS2R8Q9NYW2 309 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 KAAG1Q9UBP8 84 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 PCNX1Q96RV3 2341 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 FAM208BQ5VWN6 2430 aa5.83□□□□□ -1.48
LSM3P3-201ENST00000436601 USP9XQ93008 2570 aaPredicted RBP5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 RAI1Q7Z5J4 1906 aaPredicted RBP5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 TMEM30CPA0ZSE6 113 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 ISPDA4D126 451 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 NKX6-3A6NJ46 265 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 CEACAM18A8MTB9 384 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 ADAM20O43506 726 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 CD74P04233 296 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 CD3DP04234 171 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 WNT2P09544 360 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 CSF1P09603 554 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 GSTT2BP0CG30 244 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 RCC1P18754 421 aaPredicted RBP5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 HLA-DMAP28067 261 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 GPR6P46095 362 aaPredicted RBP5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 RFX2P48378 723 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 INPP1P49441 399 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 ATP5J2P56134 94 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 P2RX3P56373 397 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 ACTBP60709 375 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 ACTG1P63261 375 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 MRPS15P82914 257 aaKnown RBP5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 ASAH1Q13510 395 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 DYRK1AQ13627 763 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 EDDM3AQ14507 147 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 KCNJ8Q15842 424 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 SRSF7Q16629 238 aaKnown RBP eCLIP5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 TMEM155Q4W5P6 130 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 KRBOX4Q5JUW0 171 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 ZNF57Q68EA5 555 aaPredicted RBP5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 FAAP20Q6NZ36 180 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 ZNF841Q6ZN19 808 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 Q6ZS49 121 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 GDPD3Q7L5L3 318 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 SLC36A1Q7Z2H8 476 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 MUC20Q8N307 709 aaPredicted RBP5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 TOMM5Q8N4H5 51 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 TPRX1Q8N7U7 411 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 TMEM185AQ8NFB2 350 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 BEST4Q8NFU0 473 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 OR4D10Q8NGI6 311 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 OR5D13Q8NGL4 314 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 CCDC107Q8WV48 283 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 PERPQ96FX8 193 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 TIMD4Q96H15 378 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 DCTN5Q9BTE1 182 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 TINAGL1Q9GZM7 467 aaPredicted RBP5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 C11orf54Q9H0W9 315 aaPredicted RBP5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 BARX1Q9HBU1 254 aaPredicted RBP5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 CHMP1AQ9HD42 196 aaPredicted RBP5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 HRASLSQ9HDD0 168 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 IFT46Q9NQC8 304 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 ZNF107Q9UII5 783 aaPredicted RBP5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 KIF25Q9UIL4 384 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 ANXA10Q9UJ72 324 aa5.82□□□□□ -1.48
LSM3P3-201ENST00000436601 ANKHD1Q8IWZ3 2542 aaKnown RBP5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 CADP27708 2225 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 DIDO1Q9BTC0 2240 aaKnown RBP5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 MEIKINA0A087WXM9 373 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 IGKV1-6A0A0C4DH72 117 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 ODAMA1E959 279 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 MEX3AA1L020 520 aaKnown RBP5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 VWC2LB2RUY7 222 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 ZNF736B4DX44 427 aaPredicted RBP5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 TRDCB7Z8K6 153 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 H7C1Q1 480 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 M0QYG6 137 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 DVL1O14640 695 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 LYRM1O43325 122 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 NDUFB3O43676 98 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 RAB3DO95716 219 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 ECDO95905 644 aaPredicted RBP5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 PMP2P02689 132 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 SCTP09683 121 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 ZNF735P0CB33 412 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 GSTT2P0CG29 244 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 CGB3P0DN86 165 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 CGB7P0DN87 165 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 SPNP16150 400 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 ERP29P30040 261 aaKnown RBP5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 BTCP35070 178 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 HRH1P35367 487 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 PDLIM4P50479 330 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 TAS2R19P59542 299 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 AP3S2P59780 193 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 SEC61A1P61619 476 aaKnown RBP5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 HMGN3Q15651 99 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 PRR31Q5SQ13 230 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 STEAP1BQ6NZ63 245 aa5.81□□□□□ -1.48
LSM3P3-201ENST00000436601 TCF23Q7RTU1 214 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms