RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	SLC25A6	P12236	298 aa		13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	PPP1CC	P36873	323 aa	Known RBP	13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	CLINT1	Q14677	625 aa		13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	MDP1	Q86V88	176 aa		13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	FAM213B	Q8TBF2	198 aa		13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	RDH5	Q92781	318 aa		13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	FER1L6-AS2	Q96M78	137 aa		13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	MAGT1	Q9H0U3	335 aa		13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	SMDT1	Q9H4I9	107 aa		13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	TUBA4B	Q9H853	241 aa		13.68	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	ARHGAP21	Q5T5U3	1957 aa		13.67	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	PIGBOS1	A0A0B4J2F0	54 aa		13.67	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	DEGS1	O15121	323 aa		13.67	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	RHBDL1	O75783	438 aa		13.67	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	PAX9	P55771	341 aa		13.67	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	VAMP2	P63027	116 aa		13.67	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	OR2T2	Q6IF00	324 aa		13.67	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	C17orf78	Q8N4C9	275 aa		13.67	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	NANOS1	Q8WY41	292 aa	Known RBP	13.67	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	CLCC1	Q96S66	551 aa		13.67	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	PBDC1	Q9BVG4	233 aa		13.67	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	HIPK2	Q9H2X6	1198 aa		13.67	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	BIN3	Q9NQY0	253 aa		13.67	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	TREM2	Q9NZC2	230 aa		13.67	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	HS3ST1	O14792	307 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	CEACAM1	P13688	526 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	CA6	P23280	308 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	AWAT1	Q58HT5	328 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	OR2G3	Q8NGZ4	309 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	OR10J5	Q8NHC4	309 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	SNIP1	Q8TAD8	396 aa	Known RBP	13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	EIF5A2	Q9GZV4	153 aa	Known RBP	13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	SLC35B3	Q9H1N7	401 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	C12orf49	Q9H741	205 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	SPRR3	Q9UBC9	169 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	ZNF407	Q9C0G0	2248 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145		A0A0G2JRQ6	117 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	C7orf77	A4D0Y5	90 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	DYNLT3	P51808	116 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	ERVK11-1	P61568	191 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	OR8G1	Q15617	311 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	SHE	Q5VZ18	495 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	SPSB3	Q6PJ21	355 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	MOB1B	Q7L9L4	216 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	WDR86	Q86TI4	376 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	IL22RA1	Q8N6P7	574 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	OR5C1	Q8NGR4	320 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	RFNG	Q9Y644	331 aa		13.66	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	DMD	P11532	3685 aa		13.65	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145		A0A1B0GU03	582 aa		13.65	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	CHST1	O43916	411 aa		13.65	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	CD46	P15529	392 aa		13.65	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	OMG	P23515	440 aa		13.65	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	S100G	P29377	79 aa		13.65	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	MDH2	P40926	338 aa	Known RBP	13.65	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	RNFT1	Q5M7Z0	435 aa		13.65	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	ZNF295-AS1	Q8N0V1	137 aa		13.65	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	HIST1H2BA	Q96A08	127 aa		13.65	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.65	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	C14orf79	Q96F83	325 aa		13.65	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	ESRP2	Q9H6T0	727 aa	Known RBP	13.65	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	RPS10P5	Q9NQ39	176 aa		13.65	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	FREM2	Q5SZK8	3169 aa		13.65	□□□□□ -0.22
HLA-DQB2-231	ENST00000435145	MED13	Q9UHV7	2174 aa		13.65	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	LRP5L	A4QPB2	252 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	BTBD17	A6NE02	478 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	ARGFX	A6NJG6	315 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	C3orf80	F5H4A9	247 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	HSPA12A	O43301	675 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	TNFSF12	O43508	249 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	TNFSF15	O95150	251 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	IGLV2-14	P01704	120 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	ZNF14	P17017	642 aa	Predicted RBP	13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	EPHA1	P21709	976 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	RNF212	Q495C1	297 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	GPR146	Q96CH1	333 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	RTL8A	Q9BWD3	113 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	DEFB127	Q9H1M4	99 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	ZDHHC11	Q9H8X9	412 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	ERRFI1	Q9UJM3	462 aa	Predicted RBP	13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	FBXO7	Q9Y3I1	522 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	TRGV5	A0A0B4J1U4	118 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	MED19	A0JLT2	244 aa	Predicted RBP	13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	ZNF44	P15621	663 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	SPINK2	P20155	84 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	HABP2	Q14520	560 aa	Predicted RBP	13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	TESK1	Q15569	626 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	ZNF497	Q6ZNH5	498 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145		Q8IYB0	196 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	OR10V1	Q8NGI7	309 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	ABHD14A	Q9BUJ0	271 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	OR51B6	Q9H340	312 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	OR1A1	Q9P1Q5	309 aa		13.64	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	CST7	O76096	145 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	MT-ND4L	P03901	98 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	AKR1C3	P42330	323 aa		13.63	□□□□□ -0.23
HLA-DQB2-231	ENST00000435145	CCL20	P78556	96 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms