RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 C9JQL5 133 aa15.81■□□□□ 0.12
CLK1-205ENST00000434813 HS3ST1O14792 307 aa15.81■□□□□ 0.12
CLK1-205ENST00000434813 DEGS1O15121 323 aa15.81■□□□□ 0.12
CLK1-205ENST00000434813 PITX3O75364 302 aa15.81■□□□□ 0.12
CLK1-205ENST00000434813 RHBDL1O75783 438 aa15.81■□□□□ 0.12
CLK1-205ENST00000434813 SPINK2P20155 84 aa15.81■□□□□ 0.12
CLK1-205ENST00000434813 PLA2G5P39877 138 aa15.81■□□□□ 0.12
CLK1-205ENST00000434813 POLR2GP62487 172 aaKnown RBP eCLIP15.81■□□□□ 0.12
CLK1-205ENST00000434813 FLI1Q01543 452 aaPredicted RBP15.81■□□□□ 0.12
CLK1-205ENST00000434813 ZNF324BQ6AW86 544 aaPredicted RBP15.81■□□□□ 0.12
CLK1-205ENST00000434813 H1FOOQ8IZA3 346 aaPredicted RBP15.81■□□□□ 0.12
CLK1-205ENST00000434813 SH3BGRL3Q9H299 93 aa15.81■□□□□ 0.12
CLK1-205ENST00000434813 LYRM2Q9NU23 88 aaPredicted RBP15.81■□□□□ 0.12
CLK1-205ENST00000434813 CACFD1Q9UGQ2 172 aa15.81■□□□□ 0.12
CLK1-205ENST00000434813 OR2W1Q9Y3N9 320 aa15.81■□□□□ 0.12
CLK1-205ENST00000434813 CELSR3Q9NYQ7 3312 aa15.81■□□□□ 0.12
CLK1-205ENST00000434813 PIEZO1Q92508 2521 aa15.81■□□□□ 0.12
CLK1-205ENST00000434813 IGSF23A1L1A6 192 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 LRP5LA4QPB2 252 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 NPIPB11E5RHQ5 1161 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 SMPD2O60906 423 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 HEXAP06865 529 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 SNCAP37840 140 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 MDH2P40926 338 aaKnown RBP15.8■□□□□ 0.12
CLK1-205ENST00000434813 CAMLGP49069 296 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 ZNF266Q14584 549 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 FAM76BQ5HYJ3 339 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 Q6P435 159 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 TMPRSS7Q7RTY8 843 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 GPHA2Q96T91 129 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 PARP12Q9H0J9 701 aaKnown RBP15.8■□□□□ 0.12
CLK1-205ENST00000434813 FAM24AA6NFZ4 105 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 PGLYRP1O75594 196 aaPredicted RBP15.8■□□□□ 0.12
CLK1-205ENST00000434813 LMO1P25800 156 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 ZNF616Q08AN1 781 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 MOB1BQ7L9L4 216 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 MYPOPQ86VE0 399 aaPredicted RBP15.8■□□□□ 0.12
CLK1-205ENST00000434813 Q8IYB0 196 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 HSD17B11Q8NBQ5 300 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 OR10J5Q8NHC4 309 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 PLEKHF2Q9H8W4 249 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 C19orf12Q9NSK7 152 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 TREM2Q9NZC2 230 aa15.8■□□□□ 0.12
CLK1-205ENST00000434813 NKX2-8O15522 239 aa15.79■□□□□ 0.12
CLK1-205ENST00000434813 SSSCA1O60232 199 aa15.79■□□□□ 0.12
CLK1-205ENST00000434813 WNT2P09544 360 aa15.79■□□□□ 0.12
CLK1-205ENST00000434813 MMP9P14780 707 aa15.79■□□□□ 0.12
CLK1-205ENST00000434813 ZNF44P15621 663 aa15.79■□□□□ 0.12
CLK1-205ENST00000434813 F2RP25116 425 aa15.79■□□□□ 0.12
CLK1-205ENST00000434813 S100GP29377 79 aa15.79■□□□□ 0.12
CLK1-205ENST00000434813 TNFSF10P50591 281 aa15.79■□□□□ 0.12
CLK1-205ENST00000434813 MRPL49Q13405 166 aaKnown RBP15.79■□□□□ 0.12
CLK1-205ENST00000434813 WDR86Q86TI4 376 aa15.79■□□□□ 0.12
CLK1-205ENST00000434813 PLPPR1Q8TBJ4 325 aa15.79■□□□□ 0.12
CLK1-205ENST00000434813 SLC25A31Q9H0C2 315 aa15.79■□□□□ 0.12
CLK1-205ENST00000434813 GLRX2Q9NS18 164 aa15.79■□□□□ 0.12
CLK1-205ENST00000434813 KPTNQ9Y664 436 aa15.79■□□□□ 0.12
CLK1-205ENST00000434813 PIGBOS1A0A0B4J2F0 54 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 H7C2Y5 167 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 CELA3BP08861 270 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 ID3Q02535 119 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 HMGN3Q15651 99 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 CXorf66Q5JRM2 361 aaPredicted RBP15.78■□□□□ 0.12
CLK1-205ENST00000434813 P4HA3Q7Z4N8 544 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 SCRT1Q9BWW7 348 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 CLCF1Q9UBD9 225 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 POLDIP2Q9Y2S7 368 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 K7N7A8 449 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 TM4SF5O14894 197 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 FHITP49789 147 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 ERVK11-1P61568 191 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 PPP1CBP62140 327 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 VAMP2P63027 116 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 PMP22Q01453 160 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 TGFBR3Q03167 851 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 SHEQ5VZ18 495 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 TMEM252Q8N6L7 170 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 PRELID1Q9Y255 219 aa15.78■□□□□ 0.12
CLK1-205ENST00000434813 TNFSF12O43508 249 aa15.77■□□□□ 0.12
CLK1-205ENST00000434813 TSPAN9O75954 239 aa15.77■□□□□ 0.12
CLK1-205ENST00000434813 PRH1P02810 166 aa15.77■□□□□ 0.12
CLK1-205ENST00000434813 IGHV1-2P23083 117 aa15.77■□□□□ 0.12
CLK1-205ENST00000434813 UBE2NP61088 152 aaKnown RBP15.77■□□□□ 0.12
CLK1-205ENST00000434813 BAXQ07812 192 aa15.77■□□□□ 0.12
CLK1-205ENST00000434813 SRSF6Q13247 344 aaKnown RBP15.77■□□□□ 0.12
CLK1-205ENST00000434813 MAGT1Q9H0U3 335 aa15.77■□□□□ 0.12
CLK1-205ENST00000434813 CDH20Q9HBT6 801 aa15.77■□□□□ 0.12
CLK1-205ENST00000434813 C3orf80F5H4A9 247 aa15.77■□□□□ 0.11
CLK1-205ENST00000434813 C1QL1O75973 258 aa15.77■□□□□ 0.11
CLK1-205ENST00000434813 IGHG3P01860 377 aa15.77■□□□□ 0.11
CLK1-205ENST00000434813 CLINT1Q14677 625 aa15.77■□□□□ 0.11
CLK1-205ENST00000434813 PEA15Q15121 130 aa15.77■□□□□ 0.11
CLK1-205ENST00000434813 IGFBP7Q16270 282 aa15.77■□□□□ 0.11
CLK1-205ENST00000434813 GUK1Q16774 197 aa15.77■□□□□ 0.11
CLK1-205ENST00000434813 SCCPDHQ8NBX0 429 aa15.77■□□□□ 0.11
CLK1-205ENST00000434813 TMEM171Q8WVE6 324 aa15.77■□□□□ 0.11
CLK1-205ENST00000434813 AKR1E2Q96JD6 320 aa15.77■□□□□ 0.11
CLK1-205ENST00000434813 OR2J1Q9GZK6 312 aa15.77■□□□□ 0.11
CLK1-205ENST00000434813 PRELID3BQ9Y3B1 194 aa15.77■□□□□ 0.11
CLK1-205ENST00000434813 ESPL1Q14674 2120 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms