RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 PUS1Q9Y606 427 aaKnown RBP eCLIP10.08□□□□□ -0.8
CD44-209ENST00000433892 R4GN57 208 aa10.08□□□□□ -0.8
CD44-209ENST00000433892 NBEAQ8NFP9 2946 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 TRAV24A0A0B4J272 114 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 A0A1W2PPE2 198 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 CLEC18AA5D8T8 446 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 EIF3GO75821 320 aaKnown RBP eCLIP10.07□□□□□ -0.8
CD44-209ENST00000433892 IFNA4P05014 189 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 CTXN2P0C2S0 81 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 CBR1P16152 277 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 MEOX2P50222 304 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 SULT1A1P50225 295 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 PLP2Q04941 152 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 ZNF154Q13106 437 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 RNF212Q495C1 297 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 HIKESHIQ53FT3 197 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 SOHLH1Q5JUK2 328 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 SPSB3Q6PJ21 355 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 CLEC18CQ8NCF0 446 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 OR51H1Q8NH63 302 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 IL1F10Q8WWZ1 152 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 ZPBPQ9BS86 351 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 SPRY4Q9C004 299 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 TUBA4BQ9H853 241 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 DSPP15924 2871 aaKnown RBP10.07□□□□□ -0.8
CD44-209ENST00000433892 COL27A1Q8IZC6 1860 aaPredicted RBP10.07□□□□□ -0.8
CD44-209ENST00000433892 A0A0G2JRQ6 117 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 A0A1W2PPE3 182 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 ARGFXA6NJG6 315 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 C19orf67A6NJJ6 358 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 ANKRD30BLA7E2S9 258 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 H0Y980 276 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 H3BP45 60 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 WRBO00258 174 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 HSPA12AO43301 675 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 S100A6P06703 90 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 ARR3P36575 388 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 WNT5AP41221 380 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 CEBPGP53567 150 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 PLGLB1Q02325 96 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 IZUMO4Q1ZYL8 232 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 EIF2S3LQ2VIR3 472 aaKnown RBP10.07□□□□□ -0.8
CD44-209ENST00000433892 SPATA46Q5T0L3 261 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 VASH2Q86V25 355 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 KDF1Q8NAX2 398 aaPredicted RBP10.07□□□□□ -0.8
CD44-209ENST00000433892 OR5D13Q8NGL4 314 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 OR1J1Q8NGS3 322 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 C12orf49Q9H741 205 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 TAAR3PQ9P1P4 343 aa10.07□□□□□ -0.8
CD44-209ENST00000433892 ERRFI1Q9UJM3 462 aaPredicted RBP10.07□□□□□ -0.8
CD44-209ENST00000433892 MED13Q9UHV7 2174 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 TNRC6AQ8NDV7 1962 aaKnown RBP10.06□□□□□ -0.8
CD44-209ENST00000433892 SPENQ96T58 3664 aaKnown RBP10.06□□□□□ -0.8
CD44-209ENST00000433892 TRAV39A0A0B4J263 110 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 A0A1W2PNU3 283 aaPredicted RBP10.06□□□□□ -0.8
CD44-209ENST00000433892 DUXBA0A1W2PPF3 345 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 RBFOX3A6NFN3 312 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 RHBDL1O75783 438 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 RAB5AP20339 215 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 CA6P23280 308 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 F2RP25116 425 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 PAX9P55771 341 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 RHEBQ15382 184 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 HAGHQ16775 308 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 OR2T2Q6IF00 324 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 ZNF561Q8N587 486 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 OR10J5Q8NHC4 309 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 ABHD14BQ96IU4 210 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 PRSS50Q9UI38 385 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 OR2W1Q9Y3N9 320 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 RNF115Q9Y4L5 304 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 CFAP47Q6ZTR5 3102 aa10.06□□□□□ -0.8
CD44-209ENST00000433892 A0A1B0GW64 132 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 C5orf52A6NGY3 159 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 ACAA1P09110 424 aaPredicted RBP10.05□□□□□ -0.8
CD44-209ENST00000433892 ZNF14P17017 642 aaPredicted RBP10.05□□□□□ -0.8
CD44-209ENST00000433892 AGAP20933 346 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 GNG3P63215 75 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 DCAF10Q5QP82 559 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 ZNF324BQ6AW86 544 aaPredicted RBP10.05□□□□□ -0.8
CD44-209ENST00000433892 ADAM5Q6NVV9 412 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 ZNF573Q86YE8 665 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 MCEMP1Q8IX19 187 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 FAM58AQ8N1B3 248 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 PRR18Q8N4B5 295 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 RIMS4Q9H426 269 aaPredicted RBP10.05□□□□□ -0.8
CD44-209ENST00000433892 PLK3Q9H4B4 646 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 ESPL1Q14674 2120 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 SERPINE2P07093 398 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 PSG2P11465 335 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 APLNRP35414 380 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 OR2B8PP59922 312 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 BAXQ07812 192 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 DDA1Q9BW61 102 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 DLL3Q9NYJ7 618 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 OR1A1Q9P1Q5 309 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 ABI3Q9P2A4 366 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 LIPGQ9Y5X9 500 aa10.05□□□□□ -0.8
CD44-209ENST00000433892 FBP1P09467 338 aa10.04□□□□□ -0.8
CD44-209ENST00000433892 CTAG1AP78358 180 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms