RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 IGKV1D-13A0A0B4J2D9 117 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 IGKV1-13P0DP09 117 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 ARSJQ5FYB0 599 aaPredicted RBP9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 C9orf50Q5SZB4 431 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 PRAMEF20Q5VT98 475 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 ABLIM2Q6H8Q1 611 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 ZNF774Q6NX45 483 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 TOMM20LQ6UXN7 152 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 MRGPRGQ86SM5 289 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 OR10G4Q8NGN3 311 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 OR1L3Q8NH93 324 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 GATAD1Q8WUU5 269 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 TMEM170AQ8WVE7 144 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 RLN3Q8WXF3 142 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 PAM16Q9Y3D7 125 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 ADAMTS9Q9P2N4 1935 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 EYSQ5T1H1 3165 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 TMEM131Q92545 1883 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 RALGAPA1Q6GYQ0 2036 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 A0A0U1RQK1 487 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 A0A0U1RQV5 110 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 A0A1W2PNV4 684 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 HPRT1P00492 218 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 NRASP01111 189 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 MDH2P40926 338 aaKnown RBP9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 TFPI2P48307 235 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 CNN1P51911 297 aaKnown RBP9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 OR5I1Q13606 314 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 SPANXN5Q5MJ07 72 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 OR5L2Q8NGL0 311 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 SPTSSAQ969W0 71 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 ZNF837Q96EG3 531 aaPredicted RBP9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 KLHDC7BQ96G42 594 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 TMEM106CQ9BVX2 250 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 PARD6AQ9NPB6 346 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 MTCH2Q9Y6C9 303 aa9.94□□□□□ -0.82
HMGCS1-202ENST00000433297 A0A0G2JRQ6 117 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 ZNF320A2RRD8 509 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 B4E171 279 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 PDCD6O75340 191 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 GNRH1P01148 92 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 SERPINE2P07093 398 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 CCKARP32238 428 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 TSPAN7P41732 249 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 UCP3P55916 312 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 RAB35Q15286 201 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 TDRG1Q3Y452 100 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 FAM78BQ5VT40 261 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 SP5Q6BEB4 398 aaPredicted RBP9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 OR8G2PQ6IF36 304 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 POC1BQ8TC44 478 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 ZNF845Q96IR2 970 aaPredicted RBP9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 ZNF385AQ96PM9 386 aaKnown RBP9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 DIRC2Q96SL1 478 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 SLC25A22Q9H936 323 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 HS3ST3A1Q9Y663 406 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 PDGFBP01127 241 aaPredicted RBP9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 NPBWR2P48146 333 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 RPS16P62249 146 aaKnown RBP9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 MEF2BQ02080 365 aaPredicted RBP9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 CNN3Q15417 329 aaKnown RBP9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 SHBQ15464 509 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 SHHQ15465 462 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 TMEM41BQ5BJD5 291 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 C1orf194Q5T5A4 169 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 DPPA3Q6W0C5 159 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 OR10G3Q8NGC4 313 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 BADQ92934 168 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 TMEM56Q96MV1 263 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 PARLQ9H300 379 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 TAAR3PQ9P1P4 343 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 TRAPPC1Q9Y5R8 145 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 TMEM56-RWDD3S4R434 201 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 TRIOO75962 3097 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 KIAA2026Q5HYC2 2103 aa9.93□□□□□ -0.82
HMGCS1-202ENST00000433297 TRBV11-1A0A0K0K1C0 115 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 TCF21O43680 179 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 NUPR1O60356 82 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 HRASP01112 189 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 IGHV4-34P06331 123 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 EGR1P18146 543 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 HOXA6P31267 233 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 BLKP51451 505 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 ARL16Q0P5N6 197 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 ENDOGQ14249 297 aaKnown RBP9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 PLPPR5Q32ZL2 321 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 DCAF10Q5QP82 559 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 PLCXD3Q63HM9 321 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 MRPL30Q8TCC3 161 aaKnown RBP9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 SPSB1Q96BD6 273 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 R3HDM4Q96D70 268 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 PATZ1Q9HBE1 687 aaKnown RBP9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 PSENENQ9NZ42 101 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 PCDH15Q96QU1 1955 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 UBE2L5PA0A1B0GUS4 154 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 GRIFINA4D1Z8 144 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 MYF5P13349 255 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 SELEP16581 610 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 PMP22Q01453 160 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 NMSQ5H8A3 153 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms