RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 IGHV1-69DA0A0B4J2H0 117 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 KBTBD11-OT1A0A1B0GTJ5 212 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 ZNF729A6NN14 1252 aaPredicted RBP10.13□□□□□ -0.79
USP40-205ENST00000430158 MFNGO00587 321 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 IGHV1-69P01742 117 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 SRD5A1P18405 259 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 BLMHQ13867 455 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 NKAPLQ5M9Q1 402 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 HEPN1Q6WQI6 88 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 USP43Q70EL4 1123 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 TEX29Q8N6K0 151 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 OR10R2Q8NGX6 335 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 LHX4Q969G2 390 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 ISOC1Q96CN7 298 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 PRDM13Q9H4Q3 707 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.13□□□□□ -0.79
USP40-205ENST00000430158 RHBDL2Q9NX52 303 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 AK3Q9UIJ7 227 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 ETV7Q9Y603 341 aa10.13□□□□□ -0.79
USP40-205ENST00000430158 A0A087X0M5 115 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 A0A1B0GX30 115 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 A0A1W2PPH5 198 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 H3BMQ9 156 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 RCC1P18754 421 aaPredicted RBP10.12□□□□□ -0.79
USP40-205ENST00000430158 GZMHP20718 246 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 EPHA1P21709 976 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 CD34P28906 385 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 SRP14P37108 136 aaKnown RBP10.12□□□□□ -0.79
USP40-205ENST00000430158 UBE2E1P51965 193 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 BPIFB3P59826 476 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 DYNC1I2Q13409 638 aaKnown RBP10.12□□□□□ -0.79
USP40-205ENST00000430158 LDLRAD2Q5SZI1 272 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 PRAMEF5Q5TYX0 476 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 RUSC1-AS1Q66K80 236 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 Q6ZTK2 550 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 C5orf24Q7Z6I8 188 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 PRIMA1Q86XR5 153 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 PNKDQ8N490 385 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 OR4K15Q8NH41 348 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 DYNC2LI1Q8TCX1 351 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 MRGPRDQ8TDS7 321 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 KIRREL1Q96J84 757 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 ZNF48Q96MX3 618 aaPredicted RBP10.12□□□□□ -0.79
USP40-205ENST00000430158 HDHD3Q9BSH5 251 aaPredicted RBP10.12□□□□□ -0.79
USP40-205ENST00000430158 ABCG5Q9H222 651 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 PLEKHJ1Q9NW61 149 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 CALYQ9NYX4 217 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 ELF5Q9UKW6 265 aaPredicted RBP10.12□□□□□ -0.79
USP40-205ENST00000430158 SESN1Q9Y6P5 492 aa10.12□□□□□ -0.79
USP40-205ENST00000430158 METTL21EPA6NDL7 271 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 ODF3BA8MYP8 253 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 C12orf77C9JDV5 145 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 F2RL2O00254 374 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 ORC5O43913 435 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 CLPXO76031 633 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 HIST1H1DP16402 221 aaKnown RBP10.11□□□□□ -0.79
USP40-205ENST00000430158 CDK2P24941 298 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 SSTR5P35346 364 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 GLP1RP43220 463 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 LOXL3P58215 753 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 GPR157Q5UAW9 335 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 NCR3LG1Q68D85 454 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 BRD3OSQ6XYD6 125 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 ZNF782Q6ZMW2 699 aaPredicted RBP10.11□□□□□ -0.79
USP40-205ENST00000430158 ZNF565Q8N9K5 539 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 OR11H6Q8NGC7 330 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 NEK7Q8TDX7 302 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 CCDC107Q8WV48 283 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 RAB3CQ96E17 227 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 ATG5Q9H1Y0 275 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 GAL3ST2Q9H3Q3 398 aa10.11□□□□□ -0.79
USP40-205ENST00000430158 POM121CA8CG34 1229 aa10.1□□□□□ -0.79
USP40-205ENST00000430158 GNB3P16520 340 aa10.1□□□□□ -0.79
USP40-205ENST00000430158 ZNF182P17025 639 aaPredicted RBP10.1□□□□□ -0.79
USP40-205ENST00000430158 OMGP23515 440 aa10.1□□□□□ -0.79
USP40-205ENST00000430158 RORCP51449 518 aa10.1□□□□□ -0.79
USP40-205ENST00000430158 FAM189A2Q15884 450 aa10.1□□□□□ -0.79
USP40-205ENST00000430158 ZNF260Q3ZCT1 412 aa10.1□□□□□ -0.79
USP40-205ENST00000430158 FAM53AQ6NSI3 398 aaPredicted RBP10.1□□□□□ -0.79
USP40-205ENST00000430158 TRAPPC6BQ86SZ2 158 aa10.1□□□□□ -0.79
USP40-205ENST00000430158 ZNF554Q86TJ5 538 aa10.1□□□□□ -0.79
USP40-205ENST00000430158 PDZD9Q8IXQ8 264 aa10.1□□□□□ -0.79
USP40-205ENST00000430158 OR10A7Q8NGE5 316 aa10.1□□□□□ -0.79
USP40-205ENST00000430158 RFESDQ8TAC1 157 aa10.1□□□□□ -0.79
USP40-205ENST00000430158 C17orf50Q8WW18 174 aa10.1□□□□□ -0.79
USP40-205ENST00000430158 TMEM133Q9H2Q1 129 aa10.1□□□□□ -0.79
USP40-205ENST00000430158 HEXA-AS1Q9H8Q6 139 aa10.1□□□□□ -0.79
USP40-205ENST00000430158 A0A0A6YYH2 397 aa10.09□□□□□ -0.79
USP40-205ENST00000430158 IGHV2-26A0A0B4J1V2 119 aa10.09□□□□□ -0.79
USP40-205ENST00000430158 hCG_1809904A0A1W2PP81 198 aa10.09□□□□□ -0.79
USP40-205ENST00000430158 A0A1W2PPE2 198 aa10.09□□□□□ -0.79
USP40-205ENST00000430158 A0A1W2PR64 198 aa10.09□□□□□ -0.79
USP40-205ENST00000430158 A0A1W2PRV1 198 aa10.09□□□□□ -0.79
USP40-205ENST00000430158 A6NJ64 397 aa10.09□□□□□ -0.79
USP40-205ENST00000430158 SERPINE3A8MV23 424 aa10.09□□□□□ -0.79
USP40-205ENST00000430158 NPFFO15130 113 aa10.09□□□□□ -0.79
USP40-205ENST00000430158 IGLV1-47P01700 117 aa10.09□□□□□ -0.79
USP40-205ENST00000430158 MELTFP08582 738 aa10.09□□□□□ -0.79
USP40-205ENST00000430158 HMGN3Q15651 99 aa10.09□□□□□ -0.79
USP40-205ENST00000430158 CDNFQ49AH0 187 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms