RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 CXCL3P19876 107 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 ME2P23368 584 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 AGTR1P30556 359 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 CCR7P32248 378 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 GTF2BQ00403 316 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 SKP2Q13309 424 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR2F1Q13607 317 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 C1DQ13901 141 aaKnown RBP1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 RSU1Q15404 277 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 LINC00303Q3SY05 128 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 HACD4Q5VWC8 232 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 Q5W150 140 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 IGFL2Q6UWQ7 119 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 ZFP2Q6ZN57 461 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 CLEC20AQ6ZU45 233 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 FAM19A3Q7Z5A8 133 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 LINC01551Q86U37 167 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 SLC25A45Q8N413 288 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 ZIC4Q8N9L1 334 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 TMEM161BQ8NDZ6 487 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR2K2Q8NGT1 345 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR11L1Q8NGX0 322 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 DTD1Q8TEA8 209 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 ASB17Q8WXJ9 295 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 AP3S1Q92572 193 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR2A7Q96R45 310 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 ZNF382Q96SR6 550 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 EBPLQ9BY08 206 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 PECRQ9BY49 303 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 ZNF436Q9C0F3 470 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 IFI27L2Q9H2X8 130 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 HMG20AQ9NP66 347 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 LHX9Q9NQ69 397 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 PARP11Q9NR21 331 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 ZNF355PQ9NSJ1 428 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 TAS2R5Q9NYW4 299 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR12D3Q9UGF7 316 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 STOML2Q9UJZ1 356 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 TBX21Q9UL17 535 aa1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 ZNF706Q9Y5V0 76 aaPredicted RBP1.84□□□□□ -2.11
HMGB1P9-201ENST00000429856 IGSF9BQ9UPX0 1349 aa1.84□□□□□ -2.12
HMGB1P9-201ENST00000429856 KIAA1671Q9BY89 1806 aa1.84□□□□□ -2.12
HMGB1P9-201ENST00000429856 BAZ2AQ9UIF9 1905 aaKnown RBP1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 TRIP11Q15643 1979 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 IGHV7-4-1A0A0J9YVY3 117 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 CLDN24A6NM45 220 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 DENRO43583 198 aaKnown RBP1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 CCNKO75909 580 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 KCNK2O95069 426 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 CNIH1O95406 144 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 CYB5R3P00387 301 aaPredicted RBP1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 HLA-DQB1P01920 261 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 IL3P08700 152 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 ADRA2AP08913 450 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 OR4E1P0C645 316 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 OR56A5P0C7T3 313 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 LINC00614P0C842 121 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 CD28P10747 220 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 ZNF708P17019 499 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 ALOX5APP20292 161 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 CFL1P23528 166 aaKnown RBP1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 PRTN3P24158 256 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 MIPP30301 263 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 SULT1A1P50225 295 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 SULT1A2P50226 295 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 RAB14P61106 215 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 PPP1CAP62136 330 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 SLC35A2P78381 396 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 SPA17Q15506 151 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 SLC9A3R2Q15599 337 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 SSX1Q16384 188 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 HIST3H3Q16695 136 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 MESTQ5EB52 335 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 CENPWQ5EE01 88 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 TEX30Q5JUR7 227 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 UBE2NLQ5JXB2 153 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 ZNF684Q5T5D7 378 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 NXNL2Q5VZ03 156 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 OR10K2Q6IF99 312 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 SFXN4Q6P4A7 337 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 SHISA6Q6ZSJ9 500 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 OLIG3Q7RTU3 272 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 LINC00596Q86U02 117 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 MARCH3Q86UD3 253 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 AKAP14Q86UN6 197 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 NAA40Q86UY6 237 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 NT5DC3Q86UY8 548 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 NIT1Q86X76 327 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 OR6V1Q8N148 313 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 TMEM256Q8N2U0 113 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 CLDN22Q8N7P3 220 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 SLC25A29Q8N8R3 303 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 Q8N9L7 120 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 SPPL2BQ8TCT7 592 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 ORAOV1Q8WV07 137 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 EEF1AKMT1Q8WVE0 214 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 TAMM41Q96BW9 452 aa1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 IMP4Q96G21 291 aaKnown RBP1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 NARS2Q96I59 477 aaKnown RBP1.83□□□□□ -2.12
HMGB1P9-201ENST00000429856 CEP19Q96LK0 163 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms