RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 CHRNA7P36544 502 aa9.54□□□□□ -0.88
SEMA4D-209ENST00000429836 KIR2DL1P43626 348 aaPredicted RBP9.54□□□□□ -0.88
SEMA4D-209ENST00000429836 DLX2Q07687 328 aaPredicted RBP9.54□□□□□ -0.88
SEMA4D-209ENST00000429836 NSDHLQ15738 373 aa9.54□□□□□ -0.88
SEMA4D-209ENST00000429836 ZNF818PQ6ZRF7 136 aa9.54□□□□□ -0.88
SEMA4D-209ENST00000429836 POC1BQ8TC44 478 aa9.54□□□□□ -0.88
SEMA4D-209ENST00000429836 SCGB1C1Q8TD33 95 aa9.54□□□□□ -0.88
SEMA4D-209ENST00000429836 MAP1LC3BQ9GZQ8 125 aa9.54□□□□□ -0.88
SEMA4D-209ENST00000429836 DNAJC4Q9NNZ3 241 aa9.54□□□□□ -0.88
SEMA4D-209ENST00000429836 WNT16Q9UBV4 365 aa9.54□□□□□ -0.88
SEMA4D-209ENST00000429836 LTBP2Q14767 1821 aa9.54□□□□□ -0.88
SEMA4D-209ENST00000429836 IGHV3-20A0A0C4DH32 117 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 ARL16Q0P5N6 197 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 ENDOGQ14249 297 aaKnown RBP9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 ACOT6Q3I5F7 207 aaPredicted RBP9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 SLC25A47Q6Q0C1 308 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 MRGPRGQ86SM5 289 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 ZNF295-AS1Q8N0V1 137 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 SLC22A18ASQ8N1D0 253 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 GAPTQ8N292 157 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 C11orf42Q8N5U0 333 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 NEK7Q8TDX7 302 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 MBD3L1Q8WWY6 194 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 DDIT4LQ96D03 193 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 TMEM56Q96MV1 263 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 RASL10BQ96S79 203 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 P2RX4Q99571 388 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 HIPK2Q9H2X6 1198 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 FBRSQ9HAH7 460 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 TAAR3PQ9P1P4 343 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 TMEM56-RWDD3S4R434 201 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 KBTBD11O94819 623 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 IL6RP08887 468 aaPredicted RBP9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 IAPPP10997 89 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 CD82P27701 267 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 GFERP55789 205 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 GRB2P62993 217 aaKnown RBP9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 NMSQ5H8A3 153 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 RNASE8Q8TDE3 154 aaKnown RBP9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 PP6455Q8WZ26 134 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 PARLQ9H300 379 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 IGFLR1Q9H665 355 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 ALKBH4Q9NXW9 302 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 RNF115Q9Y4L5 304 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 BRWD1Q9NSI6 2320 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 PCDH15Q96QU1 1955 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 IGKV1-12A0A0C4DH73 117 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 NPIPB13A6NJU9 1138 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 NPIPB4C9JG80 1138 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 TRAF3IP2O43734 574 aaPredicted RBP9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 TNFP01375 233 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 IGKV1D-12P01611 117 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 MDH2P40926 338 aaKnown RBP9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 SRPXP78539 464 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 RSPO1Q2MKA7 263 aaPredicted RBP9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 SNAI3Q3KNW1 292 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 ZCCHC14Q8WYQ9 949 aaKnown RBP9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 LHX4Q969G2 390 aa9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 ZNF845Q96IR2 970 aaPredicted RBP9.53□□□□□ -0.88
SEMA4D-209ENST00000429836 FRYLO94915 3013 aa9.52□□□□□ -0.88
SEMA4D-209ENST00000429836 IGKV1D-13A0A0B4J2D9 117 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 KIR2DS5A0A0G2JLQ3 304 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 A0A0G2JNG1 304 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 A0A1W2PQF6 199 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 GRIFINA4D1Z8 144 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 VSTM2BA6NLU5 285 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 KIR2DS3K7RE56 304 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 TNFRSF10CO14798 259 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 TRAPPC6AO75865 159 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 IGLV3-1P01715 115 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 IGKV1-13P0DP09 117 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 MEF2BQ02080 365 aaPredicted RBP9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 KIR2DS5Q14953 304 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 C9orf50Q5SZB4 431 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 FAM78BQ5VT40 261 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 MIEN1Q9BRT3 115 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 ZNF442Q9H7R0 627 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 FOXJ2Q9P0K8 574 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 COPS7AQ9UBW8 275 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 ST3GAL6Q9Y274 331 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 IGKV3D-11A0A0A0MRZ8 115 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 IGHV5-51A0A0C4DH38 117 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 H3BMH7 237 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 GYPAP02724 150 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 HOXB2P14652 356 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 IL3RAP26951 378 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 NPBWR2P48146 333 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 OR4F5Q8NH21 305 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 OR4F4Q96R69 305 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 GPR35Q9HC97 309 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 TRAPPC1Q9Y5R8 145 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 RALGAPA1Q6GYQ0 2036 aa9.52□□□□□ -0.89
SEMA4D-209ENST00000429836 THADAQ6YHU6 1953 aa9.51□□□□□ -0.89
SEMA4D-209ENST00000429836 ANKUB1A6NFN9 424 aa9.51□□□□□ -0.89
SEMA4D-209ENST00000429836 IFNA1P01562 189 aa9.51□□□□□ -0.89
SEMA4D-209ENST00000429836 IGKV1D-33P01593 117 aa9.51□□□□□ -0.89
SEMA4D-209ENST00000429836 IGKV1-33P01594 117 aa9.51□□□□□ -0.89
SEMA4D-209ENST00000429836 CDKN1AP38936 164 aa9.51□□□□□ -0.89
SEMA4D-209ENST00000429836 RAB7AP51149 207 aa9.51□□□□□ -0.89
SEMA4D-209ENST00000429836 HIST1H3AP68431 136 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms