RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 SERPINA2P20848 420 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 ZNF93P35789 620 aaPredicted RBP12.24□□□□□ -0.45
SEC13-210ENST00000428626 THBS3P49746 956 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 RAB7AP51149 207 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 RPS11P62280 158 aaKnown RBP eCLIP12.24□□□□□ -0.45
SEC13-210ENST00000428626 DOC2BQ14184 412 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 CCDC58Q4VC31 144 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 C11orf87Q6NUJ2 197 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 C8orf86Q6ZUL3 223 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 OR2W3Q7Z3T1 314 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 OR8H3Q8N146 312 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 Q8N6K4 173 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 OR10A7Q8NGE5 316 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 OR52N1Q8NH53 320 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 CCDC107Q8WV48 283 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 METTL9Q9H1A3 318 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 TMEM138Q9NPI0 162 aa12.24□□□□□ -0.45
SEC13-210ENST00000428626 TRAV8-7A0A075B6U6 113 aa12.23□□□□□ -0.45
SEC13-210ENST00000428626 IGHV1-3A0A0C4DH29 117 aa12.23□□□□□ -0.45
SEC13-210ENST00000428626 TRBV5-5A0A0J9YX44 114 aa12.23□□□□□ -0.45
SEC13-210ENST00000428626 ZNF736B4DX44 427 aaPredicted RBP12.23□□□□□ -0.45
SEC13-210ENST00000428626 SLC31A2O15432 143 aa12.23□□□□□ -0.45
SEC13-210ENST00000428626 IGHG2P01859 326 aa12.23□□□□□ -0.45
SEC13-210ENST00000428626 CD2P06729 351 aa12.23□□□□□ -0.45
SEC13-210ENST00000428626 DCKP27707 260 aa12.23□□□□□ -0.45
SEC13-210ENST00000428626 ZNF816Q0VGE8 651 aaPredicted RBP12.23□□□□□ -0.45
SEC13-210ENST00000428626 SLC16A12Q6ZSM3 486 aa12.23□□□□□ -0.45
SEC13-210ENST00000428626 ZFP41Q8N8Y5 198 aa12.23□□□□□ -0.45
SEC13-210ENST00000428626 ZNF485Q8NCK3 441 aa12.23□□□□□ -0.45
SEC13-210ENST00000428626 TMEM104Q8NE00 496 aa12.23□□□□□ -0.45
SEC13-210ENST00000428626 OR10X1Q8NGY0 326 aa12.23□□□□□ -0.45
SEC13-210ENST00000428626 ARL11Q969Q4 196 aa12.23□□□□□ -0.45
SEC13-210ENST00000428626 ST6GALNAC6Q969X2 333 aa12.23□□□□□ -0.45
SEC13-210ENST00000428626 SMIM19Q96E16 107 aa12.23□□□□□ -0.45
SEC13-210ENST00000428626 CPNE2Q96FN4 548 aaPredicted RBP12.23□□□□□ -0.45
SEC13-210ENST00000428626 EAF1Q96JC9 268 aaPredicted RBP12.23□□□□□ -0.45
SEC13-210ENST00000428626 DUX3Q96PT4 197 aa12.23□□□□□ -0.45
SEC13-210ENST00000428626 BABAM2Q9NXR7 383 aa12.23□□□□□ -0.45
SEC13-210ENST00000428626 TMEM30CPA0ZSE6 113 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 SERPINE3A8MV23 424 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 CCRL2O00421 344 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 MT-ND4P03905 459 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 BDKRB2P30411 391 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 SLC22A6Q4U2R8 563 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 DMKNQ6E0U4 476 aaPredicted RBP12.22□□□□□ -0.45
SEC13-210ENST00000428626 ZNF497Q6ZNH5 498 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 LCNL1Q6ZST4 164 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 SLC35E3Q7Z769 313 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 MOB3BQ86TA1 216 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 STPG2Q8N412 459 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 LINC00311Q8N616 119 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 Q8N9W7 124 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 CHPT1Q8WUD6 406 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 GHSRQ92847 366 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 PGLYRP3Q96LB9 341 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 P2RX4Q99571 388 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 ZNF184Q99676 751 aaPredicted RBP12.22□□□□□ -0.45
SEC13-210ENST00000428626 PLSCR3Q9NRY6 295 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 GFOD1Q9NXC2 390 aa12.22□□□□□ -0.45
SEC13-210ENST00000428626 SMPD3Q9NY59 655 aaPredicted RBP12.22□□□□□ -0.45
SEC13-210ENST00000428626 DIMT1Q9UNQ2 313 aaKnown RBP12.22□□□□□ -0.45
SEC13-210ENST00000428626 SDCBPO00560 298 aaPredicted RBP12.21□□□□□ -0.45
SEC13-210ENST00000428626 DUS4LO95620 317 aaKnown RBP12.21□□□□□ -0.45
SEC13-210ENST00000428626 CSTBP04080 98 aaKnown RBP12.21□□□□□ -0.45
SEC13-210ENST00000428626 GAPDHP04406 335 aaKnown RBP12.21□□□□□ -0.45
SEC13-210ENST00000428626 GZMHP20718 246 aa12.21□□□□□ -0.45
SEC13-210ENST00000428626 ZNF134P52741 427 aa12.21□□□□□ -0.45
SEC13-210ENST00000428626 PPP3R1P63098 170 aa12.21□□□□□ -0.45
SEC13-210ENST00000428626 RIPK1Q13546 671 aa12.21□□□□□ -0.45
SEC13-210ENST00000428626 ATAD3CQ5T2N8 411 aa12.21□□□□□ -0.45
SEC13-210ENST00000428626 C5orf24Q7Z6I8 188 aa12.21□□□□□ -0.45
SEC13-210ENST00000428626 IZUMO1Q8IYV9 350 aa12.21□□□□□ -0.45
SEC13-210ENST00000428626 ZNF439Q8NDP4 499 aa12.21□□□□□ -0.45
SEC13-210ENST00000428626 OR52M1Q8NGK5 317 aa12.21□□□□□ -0.45
SEC13-210ENST00000428626 TENM3Q9P273 2699 aa12.2□□□□□ -0.46
SEC13-210ENST00000428626 TRBV5-7A0A0A0MS05 114 aa12.2□□□□□ -0.46
SEC13-210ENST00000428626 A0A1W2PPK0 400 aa12.2□□□□□ -0.46
SEC13-210ENST00000428626 C12orf77C9JDV5 145 aa12.2□□□□□ -0.46
SEC13-210ENST00000428626 ORC5O43913 435 aa12.2□□□□□ -0.46
SEC13-210ENST00000428626 GPX5O75715 221 aa12.2□□□□□ -0.46
SEC13-210ENST00000428626 VHLP40337 213 aa12.2□□□□□ -0.46
SEC13-210ENST00000428626 GPR12P47775 334 aa12.2□□□□□ -0.46
SEC13-210ENST00000428626 MPV17LQ2QL34 196 aa12.2□□□□□ -0.46
SEC13-210ENST00000428626 DEFB121Q5J5C9 76 aa12.2□□□□□ -0.46
SEC13-210ENST00000428626 TMPRSS11AQ6ZMR5 421 aa12.2□□□□□ -0.46
SEC13-210ENST00000428626 LYPD6Q86Y78 171 aa12.2□□□□□ -0.46
SEC13-210ENST00000428626 KLHL30-AS1Q8NEE0 82 aa12.2□□□□□ -0.46
SEC13-210ENST00000428626 RTN4IP1Q8WWV3 396 aaPredicted RBP12.2□□□□□ -0.46
SEC13-210ENST00000428626 MUL1Q969V5 352 aa12.2□□□□□ -0.46
SEC13-210ENST00000428626 RCC2Q9P258 522 aaKnown RBP12.2□□□□□ -0.46
SEC13-210ENST00000428626 AIPO00170 330 aa12.19□□□□□ -0.46
SEC13-210ENST00000428626 BAG2O95816 211 aa12.19□□□□□ -0.46
SEC13-210ENST00000428626 RPLP1P05386 114 aaKnown RBP12.19□□□□□ -0.46
SEC13-210ENST00000428626 GTF2F2P13984 249 aa12.19□□□□□ -0.46
SEC13-210ENST00000428626 Q499Y3 187 aa12.19□□□□□ -0.46
SEC13-210ENST00000428626 LAIR2Q6ISS4 152 aa12.19□□□□□ -0.46
SEC13-210ENST00000428626 LINC00596Q86U02 117 aa12.19□□□□□ -0.46
SEC13-210ENST00000428626 TGIF2LXQ8IUE1 241 aa12.19□□□□□ -0.46
SEC13-210ENST00000428626 C8orf31Q8N9H6 132 aa12.19□□□□□ -0.46
SEC13-210ENST00000428626 ZNF555Q8NEP9 628 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms