RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 GAPTQ8N292 157 aa12.43□□□□□ -0.42
VARS2-203ENST00000428017 Q8N7P7 452 aa12.43□□□□□ -0.42
VARS2-203ENST00000428017 MCFD2Q8NI22 146 aa12.43□□□□□ -0.42
VARS2-203ENST00000428017 MRPL30Q8TCC3 161 aaKnown RBP12.43□□□□□ -0.42
VARS2-203ENST00000428017 LHX4Q969G2 390 aa12.43□□□□□ -0.42
VARS2-203ENST00000428017 ARL11Q969Q4 196 aa12.43□□□□□ -0.42
VARS2-203ENST00000428017 TBX15Q96SF7 602 aa12.43□□□□□ -0.42
VARS2-203ENST00000428017 MGAT4AQ9UM21 535 aa12.43□□□□□ -0.42
VARS2-203ENST00000428017 SESN1Q9Y6P5 492 aa12.43□□□□□ -0.42
VARS2-203ENST00000428017 ABCA2Q9BZC7 2435 aa12.43□□□□□ -0.42
VARS2-203ENST00000428017 IGHV3OR16-10A0A075B7F0 116 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 TMEM235A6NFC5 223 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 POM121CA8CG34 1229 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 XRCC3O43542 346 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 ORC5O43913 435 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 NAPSAO96009 420 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 EIF4EP06730 217 aaKnown RBP12.42□□□□□ -0.42
VARS2-203ENST00000428017 IGHV1-8P0DP01 117 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 SRD5A1P18405 259 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 OMGP23515 440 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 PITPNAQ00169 270 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 PNLIPRP3Q17RR3 467 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 HACD4Q5VWC8 232 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 OLFML2AQ68BL7 652 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 OR52W1Q6IF63 320 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 HEPN1Q6WQI6 88 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 C1orf229Q6ZS94 237 aaPredicted RBP12.42□□□□□ -0.42
VARS2-203ENST00000428017 ZNF554Q86TJ5 538 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 IZUMO1Q8IYV9 350 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 PRR18Q8N4B5 295 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 OR13D1Q8NGV5 346 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 UNKLQ9H9P5 680 aaKnown RBP12.42□□□□□ -0.42
VARS2-203ENST00000428017 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.42□□□□□ -0.42
VARS2-203ENST00000428017 KCNK7Q9Y2U2 307 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 VPS13CQ709C8 3753 aa12.42□□□□□ -0.42
VARS2-203ENST00000428017 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.42□□□□□ -0.424e-8■■□□□ 14.3
VARS2-203ENST00000428017 C12orf77C9JDV5 145 aa12.41□□□□□ -0.42
VARS2-203ENST00000428017 RCC1P18754 421 aaPredicted RBP12.41□□□□□ -0.42
VARS2-203ENST00000428017 ELK1P19419 428 aa12.41□□□□□ -0.42
VARS2-203ENST00000428017 COX7A1P24310 79 aa12.41□□□□□ -0.42
VARS2-203ENST00000428017 NFYBP25208 207 aa12.41□□□□□ -0.42
VARS2-203ENST00000428017 SSTR5P35346 364 aa12.41□□□□□ -0.42
VARS2-203ENST00000428017 LTC4SQ16873 150 aa12.41□□□□□ -0.42
VARS2-203ENST00000428017 PDZD9Q8IXQ8 264 aa12.41□□□□□ -0.42
VARS2-203ENST00000428017 RFESDQ8TAC1 157 aa12.41□□□□□ -0.42
VARS2-203ENST00000428017 CYYR1Q96J86 154 aa12.41□□□□□ -0.42
VARS2-203ENST00000428017 HDHD3Q9BSH5 251 aaPredicted RBP12.41□□□□□ -0.42
VARS2-203ENST00000428017 SUCNR1Q9BXA5 334 aa12.41□□□□□ -0.42
VARS2-203ENST00000428017 SLIRPQ9GZT3 109 aaKnown RBP12.41□□□□□ -0.42
VARS2-203ENST00000428017 TAF9BQ9HBM6 251 aa12.41□□□□□ -0.42
VARS2-203ENST00000428017 BATF3Q9NR55 127 aa12.41□□□□□ -0.42
VARS2-203ENST00000428017 MBNL3Q9NUK0 354 aaKnown RBP12.41□□□□□ -0.42
VARS2-203ENST00000428017 IDI2-AS1Q9NZ38 188 aa12.41□□□□□ -0.42
VARS2-203ENST00000428017 NUP50Q9UKX7 468 aa12.41□□□□□ -0.42
VARS2-203ENST00000428017 MRPS7Q9Y2R9 242 aaKnown RBP12.41□□□□□ -0.42
VARS2-203ENST00000428017 CELSR1Q9NYQ6 3014 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 HIVEP2P31629 2446 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 TRBV6-6A0A0A6YYG2 114 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 IGHV1-69DA0A0B4J2H0 117 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 CENPVL3A0A0U1RRI6 287 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 CRLF1O75462 422 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 IGHV1-69P01742 117 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 IGHV4-38-2P0DP08 117 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 HOXB4P17483 251 aaPredicted RBP12.4□□□□□ -0.42
VARS2-203ENST00000428017 FPR2P25090 351 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 TAS2R20P59543 309 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 BPIFB3P59826 476 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 PRB3Q04118 309 aaPredicted RBP12.4□□□□□ -0.42
VARS2-203ENST00000428017 KLRD1Q13241 179 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 C17orf58Q2M2W7 97 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 TMEM30BQ3MIR4 351 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 ZNF260Q3ZCT1 412 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 PNKDQ8N490 385 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 C11orf42Q8N5U0 333 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 DTX3Q8N9I9 347 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 OR10A7Q8NGE5 316 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 MS4A7Q9GZW8 240 aaPredicted RBP12.4□□□□□ -0.42
VARS2-203ENST00000428017 TMEM133Q9H2Q1 129 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 AUNIPQ9H7T9 357 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 EXTL2Q9UBQ6 330 aa12.4□□□□□ -0.42
VARS2-203ENST00000428017 NPIPB11E5RHQ5 1161 aa12.39□□□□□ -0.43
VARS2-203ENST00000428017 RNASEK-C17orf49H0YIS7 233 aa12.39□□□□□ -0.43
VARS2-203ENST00000428017 SDCBPO00560 298 aaPredicted RBP12.39□□□□□ -0.43
VARS2-203ENST00000428017 CTDSP2O14595 271 aa12.39□□□□□ -0.43
VARS2-203ENST00000428017 HBZP02008 142 aa12.39□□□□□ -0.43
VARS2-203ENST00000428017 FCGR3AP08637 254 aa12.39□□□□□ -0.43
VARS2-203ENST00000428017 CGB3P0DN86 165 aa12.39□□□□□ -0.43
VARS2-203ENST00000428017 CGB7P0DN87 165 aa12.39□□□□□ -0.43
VARS2-203ENST00000428017 S100A5P33763 92 aa12.39□□□□□ -0.43
VARS2-203ENST00000428017 KIR2DS4P43632 304 aa12.39□□□□□ -0.43
VARS2-203ENST00000428017 UBE2E1P51965 193 aa12.39□□□□□ -0.43
VARS2-203ENST00000428017 DLX1P56177 255 aa12.39□□□□□ -0.43
VARS2-203ENST00000428017 KIR2DS1Q14954 304 aa12.39□□□□□ -0.43
VARS2-203ENST00000428017 KLF17Q5JT82 389 aaPredicted RBP12.39□□□□□ -0.43
VARS2-203ENST00000428017 FOXB2Q5VYV0 432 aa12.39□□□□□ -0.43
VARS2-203ENST00000428017 LAX1Q8IWV1 398 aa12.39□□□□□ -0.43
VARS2-203ENST00000428017 UBALD1Q8TB05 177 aa12.39□□□□□ -0.43
VARS2-203ENST00000428017 NUDCD2Q8WVJ2 157 aa12.39□□□□□ -0.43
VARS2-203ENST00000428017 TNFRSF14Q92956 283 aa12.39□□□□□ -0.43
VARS2-203ENST00000428017 GALMQ96C23 342 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms