RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 OR5AU1Q8NGC0 362 aa14.67□□□□□ -0.06
PSPC1-202ENST00000427943 CCDC107Q8WV48 283 aa14.67□□□□□ -0.06
PSPC1-202ENST00000427943 DERL3Q96Q80 235 aa14.67□□□□□ -0.06
PSPC1-202ENST00000427943 PLCXD1Q9NUJ7 323 aa14.67□□□□□ -0.06
PSPC1-202ENST00000427943 PRKDCP78527 4128 aaKnown RBP14.66□□□□□ -0.06
PSPC1-202ENST00000427943 PIN1P1O15428 100 aa14.66□□□□□ -0.06
PSPC1-202ENST00000427943 EMX1Q04741 257 aaPredicted RBP14.66□□□□□ -0.06
PSPC1-202ENST00000427943 MADCAM1Q13477 382 aa14.66□□□□□ -0.06
PSPC1-202ENST00000427943 BEAN1Q3B7T3 259 aa14.66□□□□□ -0.06
PSPC1-202ENST00000427943 SAMD5Q5TGI4 173 aa14.66□□□□□ -0.06
PSPC1-202ENST00000427943 AWAT2Q6E213 333 aa14.66□□□□□ -0.06
PSPC1-202ENST00000427943 FAM53AQ6NSI3 398 aaPredicted RBP14.66□□□□□ -0.06
PSPC1-202ENST00000427943 DRAM1Q8N682 238 aa14.66□□□□□ -0.06
PSPC1-202ENST00000427943 OR10A7Q8NGE5 316 aa14.66□□□□□ -0.06
PSPC1-202ENST00000427943 ARL11Q969Q4 196 aa14.66□□□□□ -0.06
PSPC1-202ENST00000427943 BANF2Q9H503 90 aa14.66□□□□□ -0.06
PSPC1-202ENST00000427943 PCDHB16Q9NRJ7 776 aa14.66□□□□□ -0.06
PSPC1-202ENST00000427943 MOB4Q9Y3A3 225 aa14.66□□□□□ -0.06
PSPC1-202ENST00000427943 IGHV3-43A0A0B4J1X8 118 aa14.65□□□□□ -0.06
PSPC1-202ENST00000427943 C15orf65H3BRN8 121 aa14.65□□□□□ -0.06
PSPC1-202ENST00000427943 AIPO00170 330 aa14.65□□□□□ -0.06
PSPC1-202ENST00000427943 IGHV3-43DP0DP04 118 aa14.65□□□□□ -0.06
PSPC1-202ENST00000427943 GPR176Q14439 515 aa14.65□□□□□ -0.06
PSPC1-202ENST00000427943 HES1Q14469 280 aa14.65□□□□□ -0.06
PSPC1-202ENST00000427943 C10orf99Q6UWK7 81 aa14.65□□□□□ -0.06
PSPC1-202ENST00000427943 ZNF497Q6ZNH5 498 aa14.65□□□□□ -0.06
PSPC1-202ENST00000427943 CENPVQ7Z7K6 275 aaPredicted RBP14.65□□□□□ -0.06
PSPC1-202ENST00000427943 NANOGP1Q8N7R0 232 aa14.65□□□□□ -0.06
PSPC1-202ENST00000427943 OR4F17Q8NGA8 305 aa14.65□□□□□ -0.06
PSPC1-202ENST00000427943 OR10X1Q8NGY0 326 aa14.65□□□□□ -0.06
PSPC1-202ENST00000427943 CYYR1Q96J86 154 aa14.65□□□□□ -0.06
PSPC1-202ENST00000427943 OR4F4Q96R69 305 aa14.65□□□□□ -0.06
PSPC1-202ENST00000427943 VCXQ9H320 206 aa14.65□□□□□ -0.06
PSPC1-202ENST00000427943 FKBP14Q9NWM8 211 aa14.65□□□□□ -0.06
PSPC1-202ENST00000427943 FAM90A18PA6NE21 464 aa14.64□□□□□ -0.07
PSPC1-202ENST00000427943 FAM90A16PA6NEW6 464 aa14.64□□□□□ -0.07
PSPC1-202ENST00000427943 FAM90A20PA6NIJ5 464 aa14.64□□□□□ -0.07
PSPC1-202ENST00000427943 FAM90A9PA6NNJ1 464 aa14.64□□□□□ -0.07
PSPC1-202ENST00000427943 FAM90A12PA8MX19 464 aa14.64□□□□□ -0.07
PSPC1-202ENST00000427943 FAM90A5PA8MXJ8 464 aa14.64□□□□□ -0.07
PSPC1-202ENST00000427943 SDCBPO00560 298 aaPredicted RBP14.64□□□□□ -0.07
PSPC1-202ENST00000427943 HSD17B6O14756 317 aa14.64□□□□□ -0.07
PSPC1-202ENST00000427943 FAM90A15PP0C7V4 464 aa14.64□□□□□ -0.07
PSPC1-202ENST00000427943 FAM90A13PP0C7W8 464 aa14.64□□□□□ -0.07
PSPC1-202ENST00000427943 FAM90A14PP0C7W9 464 aa14.64□□□□□ -0.07
PSPC1-202ENST00000427943 FAM90A24PP0C7X0 464 aa14.64□□□□□ -0.07
PSPC1-202ENST00000427943 FAM106CPP0CH98 169 aa14.64□□□□□ -0.07
PSPC1-202ENST00000427943 GZMHP20718 246 aa14.64□□□□□ -0.07
PSPC1-202ENST00000427943 REG1BP48304 166 aa14.64□□□□□ -0.07
PSPC1-202ENST00000427943 CD83Q01151 205 aa14.64□□□□□ -0.07
PSPC1-202ENST00000427943 INSL4Q14641 139 aa14.64□□□□□ -0.07
PSPC1-202ENST00000427943 TCTEX1D4Q5JR98 221 aa14.64□□□□□ -0.07
PSPC1-202ENST00000427943 RCC2Q9P258 522 aaKnown RBP14.64□□□□□ -0.07
PSPC1-202ENST00000427943 NKX1-2Q9UD57 310 aaPredicted RBP14.64□□□□□ -0.07
PSPC1-202ENST00000427943 ERGIC3Q9Y282 383 aa14.64□□□□□ -0.07
PSPC1-202ENST00000427943 MCRIP1C9JLW8 97 aa14.63□□□□□ -0.07
PSPC1-202ENST00000427943 PRB2P02812 416 aaPredicted RBP14.63□□□□□ -0.07
PSPC1-202ENST00000427943 MT-ND4P03905 459 aa14.63□□□□□ -0.07
PSPC1-202ENST00000427943 MGMTP16455 207 aa14.63□□□□□ -0.07
PSPC1-202ENST00000427943 TMEM11P17152 192 aa14.63□□□□□ -0.07
PSPC1-202ENST00000427943 VHLP40337 213 aa14.63□□□□□ -0.07
PSPC1-202ENST00000427943 RAB7AP51149 207 aa14.63□□□□□ -0.07
PSPC1-202ENST00000427943 HNF4GQ14541 408 aa14.63□□□□□ -0.07
PSPC1-202ENST00000427943 RAB12Q6IQ22 244 aa14.63□□□□□ -0.07
PSPC1-202ENST00000427943 SLC16A12Q6ZSM3 486 aa14.63□□□□□ -0.07
PSPC1-202ENST00000427943 LYPD6Q86Y78 171 aa14.63□□□□□ -0.07
PSPC1-202ENST00000427943 OR8H3Q8N146 312 aa14.63□□□□□ -0.07
PSPC1-202ENST00000427943 TMEM104Q8NE00 496 aa14.63□□□□□ -0.07
PSPC1-202ENST00000427943 OR4K15Q8NH41 348 aa14.63□□□□□ -0.07
PSPC1-202ENST00000427943 TFAP2CQ92754 450 aa14.63□□□□□ -0.07
PSPC1-202ENST00000427943 SELENOIQ9C0D9 397 aa14.63□□□□□ -0.07
PSPC1-202ENST00000427943 GFOD1Q9NXC2 390 aa14.63□□□□□ -0.07
PSPC1-202ENST00000427943 ETAA1Q9NY74 926 aa14.63□□□□□ -0.07
PSPC1-202ENST00000427943 TCRBV4S1A1TA0A5B7 111 aa14.62□□□□□ -0.07
PSPC1-202ENST00000427943 M0QZK8 103 aa14.62□□□□□ -0.07
PSPC1-202ENST00000427943 ORC5O43913 435 aa14.62□□□□□ -0.07
PSPC1-202ENST00000427943 CRTAPO75718 401 aaPredicted RBP14.62□□□□□ -0.07
PSPC1-202ENST00000427943 IGKV1D-33P01593 117 aa14.62□□□□□ -0.07
PSPC1-202ENST00000427943 IGKV1-33P01594 117 aa14.62□□□□□ -0.07
PSPC1-202ENST00000427943 CD1AP06126 327 aa14.62□□□□□ -0.07
PSPC1-202ENST00000427943 CDK1P06493 297 aa14.62□□□□□ -0.07
PSPC1-202ENST00000427943 MAPK3P27361 379 aaPredicted RBP14.62□□□□□ -0.07
PSPC1-202ENST00000427943 GABPB1Q06547 395 aaPredicted RBP14.62□□□□□ -0.07
PSPC1-202ENST00000427943 OXLD1Q5BKU9 147 aa14.62□□□□□ -0.07
PSPC1-202ENST00000427943 KHDC1LQ5JSQ8 128 aa14.62□□□□□ -0.07
PSPC1-202ENST00000427943 FAM27D1Q5T7N8 215 aa14.62□□□□□ -0.07
PSPC1-202ENST00000427943 THNSL2Q86YJ6 484 aa14.62□□□□□ -0.07
PSPC1-202ENST00000427943 NKAIN3Q8N8D7 197 aa14.62□□□□□ -0.07
PSPC1-202ENST00000427943 SGCDQ92629 289 aa14.62□□□□□ -0.07
PSPC1-202ENST00000427943 MYDGFQ969H8 173 aa14.62□□□□□ -0.07
PSPC1-202ENST00000427943 FAM46BQ96A09 425 aa14.62□□□□□ -0.07
PSPC1-202ENST00000427943 MRPS24Q96EL2 167 aaKnown RBP14.62□□□□□ -0.07
PSPC1-202ENST00000427943 SPACA1Q9HBV2 294 aa14.62□□□□□ -0.07
PSPC1-202ENST00000427943 TRAPPC2LQ9UL33 140 aa14.62□□□□□ -0.07
PSPC1-202ENST00000427943 NOTCH3Q9UM47 2321 aa14.62□□□□□ -0.07
PSPC1-202ENST00000427943 IGHV3-72A0A0B4J1Y9 119 aa14.61□□□□□ -0.07
PSPC1-202ENST00000427943 C12orf77C9JDV5 145 aa14.61□□□□□ -0.07
PSPC1-202ENST00000427943 PTGES3LE9PB15 166 aa14.61□□□□□ -0.07
PSPC1-202ENST00000427943 CCRL2O00421 344 aa14.61□□□□□ -0.07
PSPC1-202ENST00000427943 PF4V1P10720 104 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms