RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 WNT9BO14905 357 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 S1PR2O95136 353 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 CYB5R3P00387 301 aaPredicted RBP12.74□□□□□ -0.37
PTPN13-203ENST00000427191 MYOGP15173 224 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 IER3P46695 156 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 FOXC1Q12948 553 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 MRGPRDQ8TDS7 321 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 ADAMTS17Q8TE56 1095 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 GHITMQ9H3K2 345 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 DEFB108AA8MXU0 73 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 H0Y8X5 98 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 CD1BP29016 333 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 MAS1LP35410 378 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 SEZ6L2Q6UXD5 910 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 ALS2Q96Q42 1657 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 SYNGR1O43759 233 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 ALKBH6Q3KRA9 238 aa12.74□□□□□ -0.37
PTPN13-203ENST00000427191 NMUP48645 174 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 ABCA3Q99758 1704 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 CHST1O43916 411 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 KIF26BQ2KJY2 2108 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 PRICKLE4Q2TBC4 344 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 CCL17Q92583 94 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 P2RX4Q99571 388 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 TNFSF18Q9UNG2 199 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 SLC16A13Q7RTY0 426 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 GPBAR1Q8TDU6 330 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 DSPPQ9NZW4 1301 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 IFNL4K9M1U5 179 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 BHLHA15Q7RTS1 189 aaPredicted RBP12.73□□□□□ -0.37
PTPN13-203ENST00000427191 ZNF665Q9H7R5 613 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 LTB4R2Q9NPC1 389 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 PMELP40967 661 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 RRN3P1Q2M238 152 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 CLEC18BQ6UXF7 455 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 WFIKKN1Q96NZ8 548 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 GNRHR2Q96P88 292 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 GALNT14Q96FL9 552 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 MS4A4AQ96JQ5 239 aa12.73□□□□□ -0.37
PTPN13-203ENST00000427191 ALX4Q9H161 411 aaPredicted RBP12.73□□□□□ -0.37
PTPN13-203ENST00000427191 POLR2GP62487 172 aaKnown RBP eCLIP12.72□□□□□ -0.37
PTPN13-203ENST00000427191 TMEM136Q6ZRR5 245 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 LRRC61Q9BV99 259 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 IGLV3-16A0A075B6K0 115 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 PPP1R17O96001 155 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 RPS27P42677 84 aaKnown RBP12.72□□□□□ -0.37
PTPN13-203ENST00000427191 FAM53AQ6NSI3 398 aaPredicted RBP12.72□□□□□ -0.37
PTPN13-203ENST00000427191 OR10J6PQ8NGY7 276 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 ELOVL1Q9BW60 279 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 PRSS36Q5K4E3 855 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 CXorf67Q86X51 503 aaPredicted RBP12.72□□□□□ -0.37
PTPN13-203ENST00000427191 HARBI1Q96MB7 349 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 C17orf51A8MQB3 221 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 OGG1O15527 345 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 EBLN2Q6P2I7 272 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 C9orf62Q8N4C0 152 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 PAXXQ9BUH6 204 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 C19orf24Q9BVV8 132 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 SCNM1Q9BWG6 230 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 PRRT4C9JH25 899 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 TMPRSS2O15393 492 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 TMEM78Q5T7P6 136 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 INSIG2Q9Y5U4 225 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 ZNF324O75467 553 aaPredicted RBP12.72□□□□□ -0.37
PTPN13-203ENST00000427191 SIRT5Q9NXA8 310 aa12.72□□□□□ -0.37
PTPN13-203ENST00000427191 COL22A1Q8NFW1 1626 aaPredicted RBP12.72□□□□□ -0.37
PTPN13-203ENST00000427191 C16orf82Q7Z2V1 217 aa12.71□□□□□ -0.37
PTPN13-203ENST00000427191 METTL26Q96S19 204 aa12.71□□□□□ -0.37
PTPN13-203ENST00000427191 RSRP1Q9BUV0 290 aa12.71□□□□□ -0.37
PTPN13-203ENST00000427191 TMUB1Q9BVT8 246 aa12.71□□□□□ -0.37
PTPN13-203ENST00000427191 PRDM7Q9NQW5 492 aa12.71□□□□□ -0.37
PTPN13-203ENST00000427191 DMKNQ6E0U4 476 aaPredicted RBP12.71□□□□□ -0.37
PTPN13-203ENST00000427191 CHST5Q9GZS9 411 aa12.71□□□□□ -0.37
PTPN13-203ENST00000427191 RAXQ9Y2V3 346 aa12.71□□□□□ -0.37
PTPN13-203ENST00000427191 LOC102724200A0A096LPH7 203 aaPredicted RBP12.71□□□□□ -0.37
PTPN13-203ENST00000427191 TMIGD3P0DMS9 266 aaPredicted RBP12.71□□□□□ -0.37
PTPN13-203ENST00000427191 GFERP55789 205 aa12.71□□□□□ -0.37
PTPN13-203ENST00000427191 EWSR1Q01844 656 aaKnown RBP eCLIP12.71□□□□□ -0.37
PTPN13-203ENST00000427191 AESQ08117 197 aa12.71□□□□□ -0.37
PTPN13-203ENST00000427191 MFRPQ9BY79 579 aa12.71□□□□□ -0.37
PTPN13-203ENST00000427191 RAB29O14966 203 aa12.71□□□□□ -0.37
PTPN13-203ENST00000427191 PPP2CBP62714 309 aa12.71□□□□□ -0.37
PTPN13-203ENST00000427191 FAM209AQ5JX71 171 aa12.71□□□□□ -0.37
PTPN13-203ENST00000427191 OR8B12Q8NGG6 310 aa12.71□□□□□ -0.37
PTPN13-203ENST00000427191 TMEM30BQ3MIR4 351 aa12.71□□□□□ -0.38
PTPN13-203ENST00000427191 DNLZQ5SXM8 178 aa12.71□□□□□ -0.38
PTPN13-203ENST00000427191 MRPL54Q6P161 138 aaKnown RBP12.71□□□□□ -0.38
PTPN13-203ENST00000427191 ANKRD37Q7Z713 158 aa12.71□□□□□ -0.38
PTPN13-203ENST00000427191 ZNF683Q8IZ20 524 aa12.71□□□□□ -0.38
PTPN13-203ENST00000427191 ZNF502Q8TBZ5 544 aa12.71□□□□□ -0.38
PTPN13-203ENST00000427191 HIST1H4GQ99525 98 aa12.71□□□□□ -0.38
PTPN13-203ENST00000427191 FAM186AA6NE01 2351 aa12.71□□□□□ -0.38
PTPN13-203ENST00000427191 TCF21O43680 179 aa12.71□□□□□ -0.38
PTPN13-203ENST00000427191 MRPL58Q14197 206 aaKnown RBP12.71□□□□□ -0.38
PTPN13-203ENST00000427191 HMGCLL1Q8TB92 370 aa12.71□□□□□ -0.38
PTPN13-203ENST00000427191 PRELID3AQ96N28 172 aa12.71□□□□□ -0.38
PTPN13-203ENST00000427191 MAP1LC3AQ9H492 121 aa12.71□□□□□ -0.38
PTPN13-203ENST00000427191 MSL2Q9HCI7 577 aa12.71□□□□□ -0.38
PTPN13-203ENST00000427191 CTSVO60911 334 aa12.7□□□□□ -0.38
PTPN13-203ENST00000427191 LGALS3P17931 250 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms