RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 IGLV3-27P01718 113 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 TRBV12-3P01733 135 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 MBP02144 154 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 MAS1P04201 325 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 RPSAP08865 295 aaKnown RBP1.32□□□□□ -2.2
PTPRC-208ENST00000427110 RBP1P09455 135 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 SLC35E2BP0CK96 405 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 CD28P10747 220 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 COX4I1P13073 169 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 OGNP20774 298 aaKnown RBP1.32□□□□□ -2.2
PTPRC-208ENST00000427110 PRSS3P35030 304 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 GDI2P50395 445 aaKnown RBP1.32□□□□□ -2.2
PTPRC-208ENST00000427110 ERFP50548 548 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 RPL14P50914 215 aaKnown RBP1.32□□□□□ -2.2
PTPRC-208ENST00000427110 CMC4P56277 68 aaPredicted RBP1.32□□□□□ -2.2
PTPRC-208ENST00000427110 MAP3K7CLP57077 242 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 RBX1P62877 108 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 RPL10AP62906 217 aaKnown RBP1.32□□□□□ -2.2
PTPRC-208ENST00000427110 SLC35A1P78382 337 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 MAPRE2Q15555 327 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 COQ5Q5HYK3 327 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 OGFRL1Q5TC84 451 aaPredicted RBP1.32□□□□□ -2.2
PTPRC-208ENST00000427110 FAM222AQ5U5X8 452 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 TMEM236Q5W0B7 351 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 CST9Q5W186 159 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 FAM45BPQ6NSW5 357 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 MED27Q6P2C8 311 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 PRSS54Q6PEW0 395 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 ZCCHC23Q6ZST2 131 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 MRPL21Q7Z2W9 205 aaKnown RBP1.32□□□□□ -2.2
PTPRC-208ENST00000427110 TAC4Q86UU9 113 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 CALHM3Q86XJ0 350 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 ARHGAP18Q8N392 663 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 SPANXA2-OT1Q8N9U9 137 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 DNAAF3Q8N9W5 541 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 ST20-AS1Q8NBB2 130 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 APCDD1LQ8NCL9 501 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 OR52K1Q8NGK4 314 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 FAM45AQ8TCE6 357 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 SPPL2BQ8TCT7 592 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 C2orf15Q8WU43 125 aaKnown RBP1.32□□□□□ -2.2
PTPRC-208ENST00000427110 KCTD4Q8WVF5 259 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 TOP1MTQ969P6 601 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 ROPN1LQ96C74 230 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 IMP4Q96G21 291 aaKnown RBP1.32□□□□□ -2.2
PTPRC-208ENST00000427110 RILPQ96NA2 401 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 ZFP3Q96NJ6 502 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 SERPINB11Q96P15 392 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 OR52B2Q96RD2 323 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 SERPINI1Q99574 410 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 MRPL57Q9BQC6 102 aaKnown RBP1.32□□□□□ -2.2
PTPRC-208ENST00000427110 TMEM175Q9BSA9 504 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 MED10Q9BTT4 135 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 THTPAQ9BU02 230 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 C1orf50Q9BV19 199 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 OR2AG1Q9H205 316 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 VCX3BQ9H321 246 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 FBXO44Q9H4M3 255 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 ARMC7Q9H6L4 198 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 EFCAB1Q9HAE3 211 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 POPDC3Q9HBV1 291 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 MRPL40Q9NQ50 206 aaKnown RBP1.32□□□□□ -2.2
PTPRC-208ENST00000427110 RBM22Q9NW64 420 aaKnown RBP eCLIP1.32□□□□□ -2.2
PTPRC-208ENST00000427110 DDIT4Q9NX09 232 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 ZMAT5Q9UDW3 170 aaKnown RBP1.32□□□□□ -2.2
PTPRC-208ENST00000427110 FBXO5Q9UKT4 447 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 PSMD13Q9UNM6 376 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 POMPQ9Y244 141 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 ZNF257Q9Y2Q1 563 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 ACOT9Q9Y305 439 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 OR51B2Q9Y5P1 312 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 ENPP4Q9Y6X5 453 aa1.32□□□□□ -2.2
PTPRC-208ENST00000427110 HEATR5BQ9P2D3 2071 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 ATG2AQ2TAZ0 1938 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 PLXND1Q9Y4D7 1925 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 TRAV8-4A0A0B4J246 113 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 SMIM31A0A1B0GVY4 71 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 A0A1W2PRF3 423 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 A0A1W2PRM7 423 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 TCRBV3S1A0A5B6 114 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 ISPDA4D126 451 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 A8MT66 165 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 BBIP1A8MTZ0 92 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 A8MWL6 223 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 ZNF99A8MXY4 864 aaPredicted RBP1.31□□□□□ -2.2
PTPRC-208ENST00000427110 PRAMEF26H0Y7S4 382 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 H0YC42 278 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 MFNGO00587 321 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 UBDO15205 165 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 KDELR3O43731 214 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 VAPBO95292 243 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 NPPAP01160 153 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 P01737 135 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 HLA-DQB2P05538 268 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 KLK1P06870 262 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 TACSTD2P09758 323 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 SLC35G6P0C7Q6 338 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 RNASE2P10153 161 aaKnown RBP1.31□□□□□ -2.2
PTPRC-208ENST00000427110 MSR1P21757 451 aa1.31□□□□□ -2.2
PTPRC-208ENST00000427110 CD52P31358 61 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms