RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 A0A1W2PRS3 328 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 KIR3DP1A8MWS1 328 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 FAM157AC9JC47 383 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 LINC00614P0C842 121 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 TESK1Q15569 626 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 TSPO2Q5TGU0 170 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 HOGA1Q86XE5 327 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 ZADH2Q8N4Q0 377 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 ZNF2Q9BSG1 426 aaPredicted RBP13.88□□□□□ -0.19
PKP4-205ENST00000426248 SAMD10Q9BYL1 202 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 C12orf49Q9H741 205 aa13.88□□□□□ -0.19
PKP4-205ENST00000426248 IGF2RP11717 2491 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 FRYLO94915 3013 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 LIPT2A6NK58 231 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 GAPDHP04406 335 aaKnown RBP13.87□□□□□ -0.19
PKP4-205ENST00000426248 RAB7AP51149 207 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 MPV17LQ2QL34 196 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 TMEM41BQ5BJD5 291 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 OR52N4Q8NGI2 321 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 OR5L1Q8NGL2 311 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 ADGRG7Q96K78 797 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 TMEM59Q9BXS4 323 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 LRP4O75096 1905 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 IFNL4K9M1U5 179 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 ONECUT2O95948 504 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 LEMD1Q68G75 181 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 ZNF709Q8N972 641 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 ASB5Q8WWX0 329 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 MED13Q9UHV7 2174 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 FAM24AA6NFZ4 105 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 HPRT1P00492 218 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 RFPL3SP0C7P2 107 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 ASAH2BP0C7U1 165 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 SRD5A2P31213 254 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 ZNF93P35789 620 aaPredicted RBP13.87□□□□□ -0.19
PKP4-205ENST00000426248 ELLP55199 621 aaPredicted RBP13.87□□□□□ -0.19
PKP4-205ENST00000426248 EMC4Q5J8M3 183 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 FNDC7Q5VTL7 733 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 HOXB13Q92826 284 aaPredicted RBP13.87□□□□□ -0.19
PKP4-205ENST00000426248 OXGR1Q96P68 337 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 SIGLEC12Q96PQ1 595 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 NAGKQ9UJ70 344 aa13.87□□□□□ -0.19
PKP4-205ENST00000426248 FPR2P25090 351 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 CHRNB4P30926 498 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 ZNF260Q3ZCT1 412 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 HIKESHIQ53FT3 197 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 MCHR2Q969V1 340 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 VAMP8Q9BV40 100 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 ANGPTL4Q9BY76 406 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 GPR132Q9UNW8 380 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 MYO18BQ8IUG5 2567 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 EML5Q05BV3 1969 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 ZNF891A8MT65 544 aaPredicted RBP13.86□□□□□ -0.19
PKP4-205ENST00000426248 RRP8O43159 456 aaKnown RBP13.86□□□□□ -0.19
PKP4-205ENST00000426248 LYPD3O95274 346 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 HLA-HP01893 362 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 TK1P04183 234 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 HPNP05981 417 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 EPHA1P21709 976 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 PMP22Q01453 160 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 LINC01590Q5TEZ4 76 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 ALKBH3Q96Q83 286 aaPredicted RBP13.86□□□□□ -0.19
PKP4-205ENST00000426248 LPAR2Q9HBW0 351 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 PPIAL4AQ9Y536 164 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 SOCS1O15524 211 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 ST8SIA3O43173 380 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 GUSBP08236 651 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 P2RY1P47900 373 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 FGF8P55075 233 aaPredicted RBP13.86□□□□□ -0.19
PKP4-205ENST00000426248 RAC1P63000 192 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 COL5A1-AS1Q5SY13 56 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 SMIM15Q7Z3B0 74 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 OR10D3Q8NH80 312 aa13.86□□□□□ -0.19
PKP4-205ENST00000426248 RUNX1Q01196 453 aa13.85□□□□□ -0.19
PKP4-205ENST00000426248 ZNF266Q14584 549 aa13.85□□□□□ -0.19
PKP4-205ENST00000426248 C5orf24Q7Z6I8 188 aa13.85□□□□□ -0.19
PKP4-205ENST00000426248 GINS3Q9BRX5 216 aa13.85□□□□□ -0.19
PKP4-205ENST00000426248 MRPS28Q9Y2Q9 187 aaKnown RBP13.85□□□□□ -0.19
PKP4-205ENST00000426248 CACNA1AO00555 2505 aa13.85□□□□□ -0.19
PKP4-205ENST00000426248 DEDDO75618 318 aa13.85□□□□□ -0.19
PKP4-205ENST00000426248 WISP1O95388 367 aa13.85□□□□□ -0.19
PKP4-205ENST00000426248 EGR3Q06889 387 aa13.85□□□□□ -0.19
PKP4-205ENST00000426248 Q0VFX4 171 aa13.85□□□□□ -0.19
PKP4-205ENST00000426248 LGI3Q8N145 548 aa13.85□□□□□ -0.19
PKP4-205ENST00000426248 OR2M7Q8NG81 312 aa13.85□□□□□ -0.19
PKP4-205ENST00000426248 OR2V1Q8NHB1 315 aa13.85□□□□□ -0.19
PKP4-205ENST00000426248 RPS4Y2Q8TD47 263 aa13.85□□□□□ -0.19
PKP4-205ENST00000426248 SMIM7Q9BQ49 75 aa13.85□□□□□ -0.19
PKP4-205ENST00000426248 FKBP2P26885 142 aaKnown RBP13.85□□□□□ -0.19
PKP4-205ENST00000426248 SLC22A24Q8N4F4 322 aa13.85□□□□□ -0.19
PKP4-205ENST00000426248 TMEM230Q96A57 120 aa13.85□□□□□ -0.19
PKP4-205ENST00000426248 PGAM5Q96HS1 289 aa13.85□□□□□ -0.19
PKP4-205ENST00000426248 OR8B4Q96RC9 309 aa13.85□□□□□ -0.19
PKP4-205ENST00000426248 FAM103A1Q9BTL3 118 aaKnown RBP13.85□□□□□ -0.19
PKP4-205ENST00000426248 A0A0J9YW62 118 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 ZNF320A2RRD8 509 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 ATP6V0CP27449 155 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 BLVRBP30043 206 aaPredicted RBP13.84□□□□□ -0.19
PKP4-205ENST00000426248 VAMP3Q15836 100 aa13.84□□□□□ -0.19
PKP4-205ENST00000426248 DPPA3Q6W0C5 159 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms