RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 VPS25Q9BRG1 176 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 C11orf70Q9BRQ4 267 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 SPXQ9BT56 116 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 OR2AG1Q9H205 316 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 TMEM231Q9H6L2 316 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 BEX1Q9HBH7 125 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 MEPEQ9NQ76 525 aaPredicted RBP2.27□□□□□ -2.05
LINC01040-201ENST00000425048 INPP5EQ9NRR6 644 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 ZCCHC3Q9NUD5 404 aaKnown RBP2.27□□□□□ -2.05
LINC01040-201ENST00000425048 DCAF13Q9NV06 445 aaKnown RBP2.27□□□□□ -2.05
LINC01040-201ENST00000425048 AIG1Q9NVV5 245 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 KLHL28Q9NXS3 571 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 YARS2Q9Y2Z4 477 aaKnown RBP2.27□□□□□ -2.05
LINC01040-201ENST00000425048 TBL2Q9Y4P3 447 aaKnown RBP2.27□□□□□ -2.05
LINC01040-201ENST00000425048 POMT1Q9Y6A1 747 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 NUP98P52948 1817 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.26□□□□□ -2.05
LINC01040-201ENST00000425048 PPIAL4EA0A075B759 164 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 FXYD6-FXYD2A0A087WZ82 144 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 A0A0A6YYH2 397 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 PPIAL4CA0A0B4J2A2 164 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 TRDV1A0A1B0GX56 115 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 A0A1W2PNV4 684 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 SMIM30A4D0T7 59 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 A6NJ64 397 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 DHRS7CA6NNS2 312 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 A8MT66 165 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF705EA8MWA4 302 aaPredicted RBP2.26□□□□□ -2.05
LINC01040-201ENST00000425048 NPIPA7E9PJI5 369 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 PPIAL4DF5H284 164 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 F6UZH7 168 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 PRAMEF26H0Y7S4 382 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 HAS3O00219 553 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 RFXANKO14593 260 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 SH2D1BO14796 132 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 PPP1R2P9O14990 202 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 GSTZ1O43708 216 aaPredicted RBP2.26□□□□□ -2.05
LINC01040-201ENST00000425048 ALOX12BO75342 701 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 OR2F2O95006 317 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 SOD1P00441 154 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 CD8AP01732 235 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 TRBC1P01850 177 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 CD74P04233 296 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 PCCBP05166 539 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 IGHV4-34P06331 123 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 SFTA3P0C7M3 94 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 SLC35E2BP0CK96 405 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 NPIPA8P0DM63 369 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 PPIAL4FP0DN26 164 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 PPIAL4GP0DN37 164 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 CD37P11049 281 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 LIPCP11150 499 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 SCGB1A1P11684 91 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 CCL2P13500 99 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 FOLR1P15328 257 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 KCNE1P15382 129 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 SDC1P18827 310 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 SRMP19623 302 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 PTNP21246 168 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 DRD5P21918 477 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 OTX1P32242 354 aaPredicted RBP2.26□□□□□ -2.05
LINC01040-201ENST00000425048 TFPI2P48307 235 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 CEBPDP49716 269 aaPredicted RBP2.26□□□□□ -2.05
LINC01040-201ENST00000425048 SULT1A1P50225 295 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 CCR8P51685 355 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 CRYBA4P53673 196 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 CDKN2DP55273 166 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 H2BFSP57053 126 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 MTPNP58546 118 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 RAB8AP61006 207 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 RPS23P62266 143 aaKnown RBP2.26□□□□□ -2.05
LINC01040-201ENST00000425048 RPS25P62851 125 aaKnown RBP2.26□□□□□ -2.05
LINC01040-201ENST00000425048 CSNK1G2P78368 415 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 RHOGP84095 191 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 SLC10A7Q0GE19 358 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 OR2F1Q13607 317 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF345Q14585 488 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 HMGN3Q15651 99 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 UBE2V2Q15819 145 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 GUK1Q16774 197 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 TMEM241Q24JQ0 296 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 HNRNPA1L2Q32P51 320 aaKnown RBP2.26□□□□□ -2.05
LINC01040-201ENST00000425048 OCIAD2Q56VL3 154 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 PDZD11Q5EBL8 140 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 COA6Q5JTJ3 125 aaKnown RBP2.26□□□□□ -2.05
LINC01040-201ENST00000425048 COL5A1-AS1Q5SY13 56 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 C22orf42Q6IC83 251 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 OR2T5Q6IEZ7 315 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 TMEM220Q6QAJ8 160 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 DRAM2Q6UX65 266 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 FBXW12Q6X9E4 464 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF836Q6ZNA1 936 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 CLEC20AQ6ZU45 233 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 MRPL21Q7Z2W9 205 aaKnown RBP2.26□□□□□ -2.05
LINC01040-201ENST00000425048 TSEN54Q7Z6J9 526 aaKnown RBP2.26□□□□□ -2.05
LINC01040-201ENST00000425048 BIVMQ86UB2 503 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 TRAPPC5Q8IUR0 188 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF547Q8IVP9 402 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 ZDHHC21Q8IVQ6 265 aa2.26□□□□□ -2.05
LINC01040-201ENST00000425048 MFSD6LQ8IWD5 586 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms