RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 FAM118AQ9NWS6 357 aa4.7□□□□□ -1.66
SDCBP-203ENST00000424270 TAS2R1Q9NYW7 299 aa4.7□□□□□ -1.66
SDCBP-203ENST00000424270 PEF1Q9UBV8 284 aaKnown RBP4.7□□□□□ -1.66
SDCBP-203ENST00000424270 PKD1P98161 4303 aa4.7□□□□□ -1.66
SDCBP-203ENST00000424270 A0A0U1RQV5 110 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 SDCBPO00560 298 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-203ENST00000424270 DEGS1O15121 323 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 GSTA4O15217 222 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 DHRS3O75911 302 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 SCAF4O95104 1147 aaKnown RBP4.69□□□□□ -1.66
SDCBP-203ENST00000424270 IFNGP01579 166 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 H2AFB1P0C5Y9 115 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 H2AFB2P0C5Z0 115 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 CLUP10909 449 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 HTR1FP30939 366 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 IFNGR2P38484 337 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 CRMP1Q14194 572 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 SERTAD4-AS1Q5TG53 156 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 Q5VSD8 79 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.69□□□□□ -1.66
SDCBP-203ENST00000424270 CLCC1Q96S66 551 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 TEAD3Q99594 435 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 FAM103A1Q9BTL3 118 aaKnown RBP4.69□□□□□ -1.66
SDCBP-203ENST00000424270 OSBPL10Q9BXB5 764 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 PBOV1Q9GZY1 135 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 NEK6Q9HC98 313 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 LGALS13Q9UHV8 139 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 KIF25Q9UIL4 384 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 PLA2G2DQ9UNK4 145 aa4.69□□□□□ -1.66
SDCBP-203ENST00000424270 TRAV10A0A0B4J240 114 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 TRBV2A0A0J9YWF9 115 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 TRBV4-1A0A0J9YWV2 114 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 A0A1W2PRQ8 180 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 RIIAD1A6NNX1 92 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 RGS16O15492 202 aaPredicted RBP4.68□□□□□ -1.66
SDCBP-203ENST00000424270 ENTPD6O75354 484 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 E2F6O75461 281 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 SERPINA3P01011 423 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 SSTR5P35346 364 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 KIR2DS2P43631 304 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 DGCR6Q14129 220 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 C5orf64Q2M2E5 130 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 DEFB114Q30KQ6 69 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 SAMD4BQ5PRF9 694 aaKnown RBP4.68□□□□□ -1.66
SDCBP-203ENST00000424270 ZNF660Q6AZW8 331 aaPredicted RBP4.68□□□□□ -1.66
SDCBP-203ENST00000424270 RBPMS2Q6ZRY4 209 aaKnown RBP4.68□□□□□ -1.66
SDCBP-203ENST00000424270 SLC16A12Q6ZSM3 486 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 TRPM8Q7Z2W7 1104 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 SPATA12Q7Z6I5 190 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 TMEM179BQ7Z7N9 219 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 SLC38A6Q8IZM9 456 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 TMEM104Q8NE00 496 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 BVESQ8NE79 360 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 LFNGQ8NES3 379 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 OR2T12Q8NG77 320 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 OR4A5Q8NH83 315 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 SNAPC3Q92966 411 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 CCDC140Q96MF4 163 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 C6orf62Q9GZU0 229 aaPredicted RBP4.68□□□□□ -1.66
SDCBP-203ENST00000424270 EGLN3Q9H6Z9 239 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 TECRQ9NZ01 308 aaKnown RBP4.68□□□□□ -1.66
SDCBP-203ENST00000424270 UBQLN2Q9UHD9 624 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 LAMP5Q9UJQ1 280 aa4.68□□□□□ -1.66
SDCBP-203ENST00000424270 IGHV3-43A0A0B4J1X8 118 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 TRAV39A0A0B4J263 110 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 SCO2A0A1W2PP80 73 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 GATBO75879 557 aaKnown RBP4.67□□□□□ -1.66
SDCBP-203ENST00000424270 IGHV3-43DP0DP04 118 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 FOLR2P14207 255 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 NCK1P16333 377 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 ZNF3P17036 446 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 AADACP22760 399 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 FCGR2BP31994 310 aaPredicted RBP4.67□□□□□ -1.66
SDCBP-203ENST00000424270 FUT6P51993 359 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 ATP1B3P54709 279 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 CX3CL1P78423 397 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 NDPQ00604 133 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 DEFA5Q01523 94 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 KLF10Q13118 480 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 ZNF146Q15072 292 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 ZNF829Q3KNS6 432 aaPredicted RBP4.67□□□□□ -1.66
SDCBP-203ENST00000424270 SPATS1Q496A3 300 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 PAN3Q58A45 887 aaKnown RBP4.67□□□□□ -1.66
SDCBP-203ENST00000424270 BCL2L15Q5TBC7 163 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 ZNF57Q68EA5 555 aaPredicted RBP4.67□□□□□ -1.66
SDCBP-203ENST00000424270 EPGNQ6UW88 154 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 KRT74Q7RTS7 529 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 POC5Q8NA72 575 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 CHST4Q8NCG5 386 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 OR5T1Q8NG75 326 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 OR1L6Q8NGR2 347 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 OR11H2Q8NH07 326 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 GRPEL2Q8TAA5 225 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 COQ2Q96H96 371 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 NDUFAF3Q9BU61 184 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 MROQ9BYG7 248 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 OR51V1Q9H2C8 321 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 IKZF2Q9UKS7 526 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 ENPP4Q9Y6X5 453 aa4.67□□□□□ -1.66
SDCBP-203ENST00000424270 DNAH17Q9UFH2 4485 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms