RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PKIAP61925 76 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 TRA2AQ13595 282 aaKnown RBP eCLIP13.03□□□□□ -0.32
C9orf3-204ENST00000424143 HERPUD1Q15011 391 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 CEACAM21Q3KPI0 293 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 LBHQ53QV2 105 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-204ENST00000424143 COA6Q5JTJ3 125 aaKnown RBP13.03□□□□□ -0.32
C9orf3-204ENST00000424143 ZNF324BQ6AW86 544 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-204ENST00000424143 GUSBP11Q6P575 273 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 PCSK4Q6UW60 755 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 ZNF383Q8NA42 475 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 SUMF1Q8NBK3 374 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 AGBL5Q8NDL9 886 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 OR5A2Q8NGI9 324 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 SCGB1C1Q8TD33 95 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 RNASEH2CQ8TDP1 164 aaKnown RBP13.03□□□□□ -0.32
C9orf3-204ENST00000424143 CA5BP1Q8WTZ4 195 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 CDH20Q9HBT6 801 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 OR2W1Q9Y3N9 320 aa13.03□□□□□ -0.32
C9orf3-204ENST00000424143 ASCC3Q8N3C0 2202 aaKnown RBP13.03□□□□□ -0.32
C9orf3-204ENST00000424143 IGKV3D-15A0A087WSY6 115 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 TGIF2-C20orf24A0A0A6YYL0 155 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 IGKV1D-13A0A0B4J2D9 117 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 FAM90A26D6RGX4 464 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 SS18L1O75177 396 aaPredicted RBP13.02□□□□□ -0.32
C9orf3-204ENST00000424143 CNOT4O95628 575 aaKnown RBP13.02□□□□□ -0.32
C9orf3-204ENST00000424143 SCTP09683 121 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 IGKV1-13P0DP09 117 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 GPX4P36969 197 aaPredicted RBP13.02□□□□□ -0.32
C9orf3-204ENST00000424143 HAAOP46952 286 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 LBX1P52954 281 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 RSPO4Q2I0M5 234 aaPredicted RBP13.02□□□□□ -0.32
C9orf3-204ENST00000424143 CEACAM16Q2WEN9 425 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 SPNS3Q6ZMD2 512 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 REC114Q7Z4M0 266 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 TGIF2LYQ8IUE0 185 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 ABHD5Q8WTS1 349 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 ZNF845Q96IR2 970 aaPredicted RBP13.02□□□□□ -0.32
C9orf3-204ENST00000424143 MAGT1Q9H0U3 335 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 CCL28Q9NRJ3 127 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 UFSP2Q9NUQ7 469 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 VAX2Q9UIW0 290 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 ABCA7Q8IZY2 2146 aa13.02□□□□□ -0.32
C9orf3-204ENST00000424143 IGKV1-6A0A0C4DH72 117 aa13.02□□□□□ -0.33
C9orf3-204ENST00000424143 A0A1B0GV50 99 aa13.02□□□□□ -0.33
C9orf3-204ENST00000424143 MED19A0JLT2 244 aaPredicted RBP13.02□□□□□ -0.33
C9orf3-204ENST00000424143 CYB5BO43169 146 aa13.02□□□□□ -0.33
C9orf3-204ENST00000424143 KLK3P07288 261 aaPredicted RBP13.02□□□□□ -0.33
C9orf3-204ENST00000424143 B4GALT1P15291 398 aa13.02□□□□□ -0.33
C9orf3-204ENST00000424143 BCL3P20749 454 aa13.02□□□□□ -0.33
C9orf3-204ENST00000424143 APLNRP35414 380 aa13.02□□□□□ -0.33
C9orf3-204ENST00000424143 ZNF154Q13106 437 aa13.02□□□□□ -0.33
C9orf3-204ENST00000424143 LRRC75BQ2VPJ9 315 aa13.02□□□□□ -0.33
C9orf3-204ENST00000424143 OR2T2Q6IF00 324 aa13.02□□□□□ -0.33
C9orf3-204ENST00000424143 ZNF343Q6P1L6 599 aa13.02□□□□□ -0.33
C9orf3-204ENST00000424143 ZNF295-AS1Q8N0V1 137 aa13.02□□□□□ -0.33
C9orf3-204ENST00000424143 OR10D4PQ8NGN7 298 aa13.02□□□□□ -0.33
C9orf3-204ENST00000424143 GPR146Q96CH1 333 aa13.02□□□□□ -0.33
C9orf3-204ENST00000424143 RFNGQ9Y644 331 aa13.02□□□□□ -0.33
C9orf3-204ENST00000424143 LAMA3Q16787 3333 aa13.02□□□□□ -0.33
C9orf3-204ENST00000424143 CCDC85CA6NKD9 419 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 C9J4A7 227 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 MKRN2OSH3BPM6 223 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 DVL1O14640 695 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 DEGS1O15121 323 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 KLF7O75840 302 aaPredicted RBP13.01□□□□□ -0.33
C9orf3-204ENST00000424143 TRGC2P03986 189 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 TRGC1P0CF51 173 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 HBG1P69891 147 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 HBG2P69892 147 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 ZFP36L1Q07352 338 aaKnown RBP13.01□□□□□ -0.33
C9orf3-204ENST00000424143 ZNF787Q6DD87 383 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 MOB1BQ7L9L4 216 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 THNSL2Q86YJ6 484 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 ZDHHC23Q8IYP9 409 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 ZNF525Q8N782 197 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 OR2Y1Q8NGV0 311 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 FGFBP3Q8TAT2 258 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 MRPL30Q8TCC3 161 aaKnown RBP13.01□□□□□ -0.33
C9orf3-204ENST00000424143 SMOC1Q9H4F8 434 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 SRD5A3Q9H8P0 318 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 RPRMQ9NS64 109 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 CA14Q9ULX7 337 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 RTTNQ86VV8 2226 aa13.01□□□□□ -0.33
C9orf3-204ENST00000424143 TRAPPC2LH3BP13 241 aa13□□□□□ -0.33
C9orf3-204ENST00000424143 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13□□□□□ -0.33
C9orf3-204ENST00000424143 SOD3P08294 240 aa13□□□□□ -0.33
C9orf3-204ENST00000424143 RUNX1Q01196 453 aa13□□□□□ -0.33
C9orf3-204ENST00000424143 PRDX4Q13162 271 aa13□□□□□ -0.33
C9orf3-204ENST00000424143 TMEM41BQ5BJD5 291 aa13□□□□□ -0.33
C9orf3-204ENST00000424143 SAP25Q8TEE9 199 aa13□□□□□ -0.33
C9orf3-204ENST00000424143 FRZBQ92765 325 aa13□□□□□ -0.33
C9orf3-204ENST00000424143 SYNGR2O43760 224 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 P04436 131 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 SERPINE2P07093 398 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 CELA2AP08217 269 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 CEACAM6P40199 344 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 MDH2P40926 338 aaKnown RBP12.99□□□□□ -0.33
C9orf3-204ENST00000424143 TMEM217Q8N7C4 229 aa12.99□□□□□ -0.33
C9orf3-204ENST00000424143 APOBEC3DQ96AK3 386 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms