RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 PRKACBP22694 351 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 MPZP25189 248 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 VHLP40337 213 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 ETV1P50549 477 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 GPM6AP51674 278 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 ATP1B3P54709 279 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 AQP4P55087 323 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 TAS2R43P59537 309 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 MICBQ29980 383 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 CHRFAM7AQ494W8 412 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 FAM201AQ5SY85 155 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 PLCXD3Q63HM9 321 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 LAIR2Q6ISS4 152 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 PET117Q6UWS5 81 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 WDR82Q6UXN9 313 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF826PQ6ZT77 177 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 Q71RC1 249 aaPredicted RBP2.03□□□□□ -2.08
VPS13A-208ENST00000423463 WDR86Q86TI4 376 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 RDH10Q8IZV5 341 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 STX19Q8N4C7 294 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 DEFB108BQ8NET1 73 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 BPIFB6Q8NFQ5 453 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 OR8B3Q8NGG8 313 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 OR5M8Q8NGP6 311 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 OR5AK2Q8NH90 309 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 HPSE2Q8WWQ2 592 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 AQP3Q92482 292 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 RPL3LQ92901 407 aaKnown RBP2.03□□□□□ -2.08
VPS13A-208ENST00000423463 MOB3AQ96BX8 217 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 C12orf43Q96C57 262 aaKnown RBP2.03□□□□□ -2.08
VPS13A-208ENST00000423463 OR8B2Q96RD0 313 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 BEX2Q9BXY8 128 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 ANKRD60Q9BZ19 345 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 PKIBQ9C010 78 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 CHST5Q9GZS9 411 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 FGF23Q9GZV9 251 aaPredicted RBP2.03□□□□□ -2.08
VPS13A-208ENST00000423463 SHARPINQ9H0F6 387 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 DNTTIP1Q9H147 329 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 DUSP21Q9H596 190 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 ISG20L2Q9H9L3 353 aaKnown RBP2.03□□□□□ -2.08
VPS13A-208ENST00000423463 PLEKHA1Q9HB21 404 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 GPR173Q9NS66 373 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 FKBP14Q9NWM8 211 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 UBAP1Q9NZ09 502 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 ERVK-18Q9QC07 812 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 KAAG1Q9UBP8 84 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 RAB26Q9ULW5 256 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 POLDIP2Q9Y2S7 368 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 ITPR3Q14573 2671 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 CRYBG3Q68DQ2 2970 aa2.03□□□□□ -2.08
VPS13A-208ENST00000423463 SPENQ96T58 3664 aaKnown RBP2.03□□□□□ -2.08
VPS13A-208ENST00000423463 KIR2DS1A0A191URI9 304 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 E9PI62 339 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 ECDO95905 644 aaPredicted RBP2.03□□□□□ -2.09
VPS13A-208ENST00000423463 TSHBP01222 138 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 CDK1P06493 297 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 CD2P06729 351 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 GLRA1P23415 457 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 CD80P33681 288 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 PITPNBP48739 271 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 RBP2P50120 134 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 CRIP2P52943 208 aaPredicted RBP2.03□□□□□ -2.09
VPS13A-208ENST00000423463 GNB2P62879 340 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 BDH1Q02338 343 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 IL24Q13007 206 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 CDK5R1Q15078 307 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 UBE2V2Q15819 145 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 ODF4Q2M2E3 257 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 MRGPRG-AS1Q2M3A8 158 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 FAM120AOSQ5T036 256 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 OR2G6Q5TZ20 316 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 WDR25Q64LD2 544 aaPredicted RBP2.03□□□□□ -2.09
VPS13A-208ENST00000423463 HAGHLQ6PII5 290 aaPredicted RBP2.03□□□□□ -2.09
VPS13A-208ENST00000423463 LYPD2Q6UXB3 125 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 IZUMO2Q6UXV1 221 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 AHSA2Q719I0 299 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 SLC36A1Q7Z2H8 476 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 TRPT1Q86TN4 253 aaKnown RBP2.03□□□□□ -2.09
VPS13A-208ENST00000423463 SERPINA12Q8IW75 414 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 MKXQ8IYA7 352 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 OR8H3Q8N146 312 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 STPG4Q8N801 248 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 ZNF485Q8NCK3 441 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 OR5D14Q8NGL3 314 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 OR13C3Q8NGS6 347 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 RPS4Y2Q8TD47 263 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 GPR148Q8TDV2 347 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 SSMEM1Q8WWF3 244 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 TMIGD2Q96BF3 282 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 FGGYQ96C11 551 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 ADAT3Q96EY9 351 aaPredicted RBP2.03□□□□□ -2.09
VPS13A-208ENST00000423463 BORCS8Q96FH0 119 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 CITED2Q99967 270 aaPredicted RBP2.03□□□□□ -2.09
VPS13A-208ENST00000423463 CDCA4Q9BXL8 241 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 YTHDF1Q9BYJ9 559 aaKnown RBP2.03□□□□□ -2.09
VPS13A-208ENST00000423463 Q9H521 79 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 METTL17Q9H7H0 456 aaPredicted RBP2.03□□□□□ -2.09
VPS13A-208ENST00000423463 CLN8Q9UBY8 286 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 OR5V1Q9UGF6 321 aa2.03□□□□□ -2.09
VPS13A-208ENST00000423463 CLEC2DQ9UHP7 191 aa2.03□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms