RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 TMEM45BQ96B21 275 aa13.48□□□□□ -0.25
CDH1-202ENST00000422392 LOXL2Q9Y4K0 774 aa13.48□□□□□ -0.25
CDH1-202ENST00000422392 COL27A1Q8IZC6 1860 aaPredicted RBP13.48□□□□□ -0.25
CDH1-202ENST00000422392 NEURL1O76050 574 aa13.48□□□□□ -0.25
CDH1-202ENST00000422392 SERPINA7P05543 415 aa13.48□□□□□ -0.25
CDH1-202ENST00000422392 CLDN18P56856 261 aa13.48□□□□□ -0.25
CDH1-202ENST00000422392 TMEM267Q0VDI3 215 aaPredicted RBP13.48□□□□□ -0.25
CDH1-202ENST00000422392 ZNF343Q6P1L6 599 aa13.48□□□□□ -0.25
CDH1-202ENST00000422392 Q6ZS49 121 aa13.48□□□□□ -0.25
CDH1-202ENST00000422392 MKXQ8IYA7 352 aa13.48□□□□□ -0.25
CDH1-202ENST00000422392 CYB561D1Q8N8Q1 229 aa13.48□□□□□ -0.25
CDH1-202ENST00000422392 PLA2G3Q9NZ20 509 aa13.48□□□□□ -0.25
CDH1-202ENST00000422392 ZFHX4Q86UP3 3567 aa13.48□□□□□ -0.25
CDH1-202ENST00000422392 PRR14LQ5THK1 2151 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 FAM90A10PA6NDY2 464 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 FAM90A18PA6NE21 464 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 FAM90A16PA6NEW6 464 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 FAM90A20PA6NIJ5 464 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 FAM90A8PA6NJQ4 464 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 FAM90A7PA6NKC0 464 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 FAM90A22PA8MWA6 464 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 FAM90A12PA8MX19 464 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 FAM90A5PA8MXJ8 464 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 FAM90A23PA8MXZ1 464 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 H3BQ15 152 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 HSPA12AO43301 675 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 TXNL1O43396 289 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 CER1O95813 267 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 IGHEP01854 428 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 FAM90A15PP0C7V4 464 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 FAM90A13PP0C7W8 464 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 FAM90A14PP0C7W9 464 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 FAM90A24PP0C7X0 464 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 PSG2P11465 335 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 SSPNQ14714 243 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 NCMAPQ5T1S8 102 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 C6orf15Q6UXA7 325 aaPredicted RBP13.47□□□□□ -0.25
CDH1-202ENST00000422392 CMTM1Q8IZ96 169 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 KDF1Q8NAX2 398 aaPredicted RBP13.47□□□□□ -0.25
CDH1-202ENST00000422392 OR2M7Q8NG81 312 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 ZNF703Q9H7S9 590 aaPredicted RBP13.47□□□□□ -0.25
CDH1-202ENST00000422392 ERRFI1Q9UJM3 462 aaPredicted RBP13.47□□□□□ -0.25
CDH1-202ENST00000422392 RNF115Q9Y4L5 304 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 URGCP-MRPS24S4R325 110 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 IGHV3-64DA0A0J9YX35 117 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 RHBDL1O75783 438 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 SPATA46Q5T0L3 261 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 APOBEC3DQ96AK3 386 aaPredicted RBP13.47□□□□□ -0.25
CDH1-202ENST00000422392 RAB39BQ96DA2 213 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 NIT2Q9NQR4 276 aa13.47□□□□□ -0.25
CDH1-202ENST00000422392 BOKQ9UMX3 212 aaPredicted RBP13.47□□□□□ -0.25
CDH1-202ENST00000422392 KMT2EQ8IZD2 1858 aa13.46□□□□□ -0.25
CDH1-202ENST00000422392 IGKV3D-15A0A087WSY6 115 aa13.46□□□□□ -0.25
CDH1-202ENST00000422392 TRAV24A0A0B4J272 114 aa13.46□□□□□ -0.25
CDH1-202ENST00000422392 KIR2DS1A0A191URI9 304 aa13.46□□□□□ -0.25
CDH1-202ENST00000422392 CD300LBA8K4G0 201 aa13.46□□□□□ -0.25
CDH1-202ENST00000422392 SLC34A2O95436 690 aa13.46□□□□□ -0.25
CDH1-202ENST00000422392 IGHV2-5P01817 119 aa13.46□□□□□ -0.25
CDH1-202ENST00000422392 TDGF1P13385 188 aa13.46□□□□□ -0.25
CDH1-202ENST00000422392 KIR2DS4P43632 304 aa13.46□□□□□ -0.25
CDH1-202ENST00000422392 ICAM4Q14773 271 aa13.46□□□□□ -0.25
CDH1-202ENST00000422392 KIR2DS1Q14954 304 aa13.46□□□□□ -0.25
CDH1-202ENST00000422392 Q6ZRM9 215 aa13.46□□□□□ -0.25
CDH1-202ENST00000422392 ZNF295-AS1Q8N0V1 137 aa13.46□□□□□ -0.25
CDH1-202ENST00000422392 OR1A1Q9P1Q5 309 aa13.46□□□□□ -0.25
CDH1-202ENST00000422392 USF3Q68DE3 2245 aa13.46□□□□□ -0.25
CDH1-202ENST00000422392 LINC00587B1AMM8 73 aa13.46□□□□□ -0.26
CDH1-202ENST00000422392 SRP19P09132 144 aaKnown RBP13.46□□□□□ -0.26
CDH1-202ENST00000422392 JMJD7P0C870 316 aa13.46□□□□□ -0.26
CDH1-202ENST00000422392 F2RP25116 425 aa13.46□□□□□ -0.26
CDH1-202ENST00000422392 MPV17LQ2QL34 196 aa13.46□□□□□ -0.26
CDH1-202ENST00000422392 HIKESHIQ53FT3 197 aa13.46□□□□□ -0.26
CDH1-202ENST00000422392 GPR146Q96CH1 333 aa13.46□□□□□ -0.26
CDH1-202ENST00000422392 A0A1B0GW64 132 aa13.45□□□□□ -0.26
CDH1-202ENST00000422392 CLEC18AA5D8T8 446 aa13.45□□□□□ -0.26
CDH1-202ENST00000422392 S100A9P06702 114 aaKnown RBP13.45□□□□□ -0.26
CDH1-202ENST00000422392 RPS10P46783 165 aaKnown RBP13.45□□□□□ -0.26
CDH1-202ENST00000422392 AKR1C8PQ5T2L2 129 aa13.45□□□□□ -0.26
CDH1-202ENST00000422392 LINC00696Q6ZRV3 163 aa13.45□□□□□ -0.26
CDH1-202ENST00000422392 THNSL2Q86YJ6 484 aa13.45□□□□□ -0.26
CDH1-202ENST00000422392 CLEC18CQ8NCF0 446 aa13.45□□□□□ -0.26
CDH1-202ENST00000422392 OR5D13Q8NGL4 314 aa13.45□□□□□ -0.26
CDH1-202ENST00000422392 HIST1H2AAQ96QV6 131 aa13.45□□□□□ -0.26
CDH1-202ENST00000422392 C12orf49Q9H741 205 aa13.45□□□□□ -0.26
CDH1-202ENST00000422392 KIAA1456Q9P272 454 aa13.45□□□□□ -0.26
CDH1-202ENST00000422392 METTL1Q9UBP6 276 aaKnown RBP13.45□□□□□ -0.26
CDH1-202ENST00000422392 MRPS18CQ9Y3D5 142 aaKnown RBP13.45□□□□□ -0.26
CDH1-202ENST00000422392 H0Y980 276 aa13.45□□□□□ -0.26
CDH1-202ENST00000422392 CLN5O75503 358 aa13.45□□□□□ -0.26
CDH1-202ENST00000422392 SCAF4O95104 1147 aaKnown RBP13.45□□□□□ -0.26
CDH1-202ENST00000422392 TAGLN2P37802 199 aaKnown RBP13.45□□□□□ -0.26
CDH1-202ENST00000422392 NRN1LQ496H8 165 aa13.45□□□□□ -0.26
CDH1-202ENST00000422392 OR2T2Q6IF00 324 aa13.45□□□□□ -0.26
CDH1-202ENST00000422392 NUFIP2Q7Z417 695 aaKnown RBP13.45□□□□□ -0.26
CDH1-202ENST00000422392 OR10J5Q8NHC4 309 aa13.45□□□□□ -0.26
CDH1-202ENST00000422392 RNASE11Q8TAA1 199 aaKnown RBP13.45□□□□□ -0.26
CDH1-202ENST00000422392 POM121L2Q96KW2 1035 aa13.45□□□□□ -0.26
CDH1-202ENST00000422392 RSG1Q9BU20 258 aa13.45□□□□□ -0.26
CDH1-202ENST00000422392 LINC00470Q9BZP3 86 aa13.45□□□□□ -0.26
CDH1-202ENST00000422392 S100A8P05109 93 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms