RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 OR5D13Q8NGL4 314 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 SPIN2AQ99865 258 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 SPIN2BQ9BPZ2 258 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 GINS3Q9BRX5 216 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 PLSCR4Q9NRQ2 329 aa16.06■□□□□ 0.16
CROCCP3-202ENST00000420820 FRYQ5TBA9 3013 aa16.05■□□□□ 0.16
CROCCP3-202ENST00000420820 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.05■□□□□ 0.16
CROCCP3-202ENST00000420820 DNASE2O00115 360 aaPredicted RBP16.05■□□□□ 0.16
CROCCP3-202ENST00000420820 CAV2P51636 162 aa16.05■□□□□ 0.16
CROCCP3-202ENST00000420820 BLOC1S1P78537 153 aa16.05■□□□□ 0.16
CROCCP3-202ENST00000420820 ACSF3Q4G176 576 aaPredicted RBP16.05■□□□□ 0.16
CROCCP3-202ENST00000420820 CLEC9AQ6UXN8 241 aa16.05■□□□□ 0.16
CROCCP3-202ENST00000420820 CMTM1Q8IZ96 169 aa16.05■□□□□ 0.16
CROCCP3-202ENST00000420820 CNEP1R1Q8N9A8 125 aa16.05■□□□□ 0.16
CROCCP3-202ENST00000420820 OR10J5Q8NHC4 309 aa16.05■□□□□ 0.16
CROCCP3-202ENST00000420820 PLPPR1Q8TBJ4 325 aa16.05■□□□□ 0.16
CROCCP3-202ENST00000420820 KLF14Q8TD94 323 aaPredicted RBP16.05■□□□□ 0.16
CROCCP3-202ENST00000420820 NARS2Q96I59 477 aaKnown RBP16.05■□□□□ 0.16
CROCCP3-202ENST00000420820 KIRREL1Q96J84 757 aa16.05■□□□□ 0.16
CROCCP3-202ENST00000420820 GPHA2Q96T91 129 aa16.05■□□□□ 0.16
CROCCP3-202ENST00000420820 HES4Q9HCC6 221 aa16.05■□□□□ 0.16
CROCCP3-202ENST00000420820 FBXO24O75426 580 aa16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 MED6O75586 246 aa16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 SEC11BP0C7V7 166 aa16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 VDAC1P21796 283 aa16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 MPV17P39210 176 aa16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 DEFB109BQ30KR1 87 aa16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 MBNL3Q9NUK0 354 aaKnown RBP16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 DKK4Q9UBT3 224 aa16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 CARHSP1Q9Y2V2 147 aaKnown RBP16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 AHRRA9YTQ3 701 aa16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 CDIPTO14735 213 aa16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 F2RP25116 425 aa16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 AKR1C2P52895 323 aa16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 DEFA5Q01523 94 aa16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 AKR1C1Q04828 323 aa16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 FOXF2Q12947 444 aa16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 TAAR6Q96RI8 345 aa16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 HRH4Q9H3N8 390 aa16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 WIPI2Q9Y4P8 454 aa16.04■□□□□ 0.16
CROCCP3-202ENST00000420820 URB1O60287 2271 aaKnown RBP16.03■□□□□ 0.16
CROCCP3-202ENST00000420820 ZNF891A8MT65 544 aaPredicted RBP16.03■□□□□ 0.16
CROCCP3-202ENST00000420820 H0YL77 283 aa16.03■□□□□ 0.16
CROCCP3-202ENST00000420820 IGLV2-14P01704 120 aa16.03■□□□□ 0.16
CROCCP3-202ENST00000420820 SPP1P10451 314 aa16.03■□□□□ 0.16
CROCCP3-202ENST00000420820 TUBG1P23258 451 aa16.03■□□□□ 0.16
CROCCP3-202ENST00000420820 NKX2-1P43699 371 aaPredicted RBP16.03■□□□□ 0.16
CROCCP3-202ENST00000420820 ID3Q02535 119 aa16.03■□□□□ 0.16
CROCCP3-202ENST00000420820 NHLH2Q02577 135 aa16.03■□□□□ 0.16
CROCCP3-202ENST00000420820 GNMTQ14749 295 aa16.03■□□□□ 0.16
CROCCP3-202ENST00000420820 TUBG2Q9NRH3 451 aa16.03■□□□□ 0.16
CROCCP3-202ENST00000420820 ZFHX4Q86UP3 3567 aa16.03■□□□□ 0.16
CROCCP3-202ENST00000420820 BORCS7-ASMTA0A0B4J1R7 106 aa16.02■□□□□ 0.16
CROCCP3-202ENST00000420820 SIRPB1O00241 398 aa16.02■□□□□ 0.16
CROCCP3-202ENST00000420820 MLNRO43193 412 aa16.02■□□□□ 0.16
CROCCP3-202ENST00000420820 ADAM20O43506 726 aa16.02■□□□□ 0.16
CROCCP3-202ENST00000420820 TNFSF13O75888 250 aa16.02■□□□□ 0.16
CROCCP3-202ENST00000420820 CGAP01215 116 aa16.02■□□□□ 0.16
CROCCP3-202ENST00000420820 IGLV1-44P01699 117 aa16.02■□□□□ 0.16
CROCCP3-202ENST00000420820 ARHGDIBP52566 201 aa16.02■□□□□ 0.16
CROCCP3-202ENST00000420820 TESK1Q15569 626 aa16.02■□□□□ 0.16
CROCCP3-202ENST00000420820 OR8G1Q15617 311 aa16.02■□□□□ 0.16
CROCCP3-202ENST00000420820 C11orf53Q8IXP5 236 aa16.02■□□□□ 0.16
CROCCP3-202ENST00000420820 OR2C3Q8N628 320 aa16.02■□□□□ 0.16
CROCCP3-202ENST00000420820 NKX6-2Q9C056 277 aaPredicted RBP16.02■□□□□ 0.16
CROCCP3-202ENST00000420820 UQCC1Q9NVA1 299 aa16.02■□□□□ 0.16
CROCCP3-202ENST00000420820 ERRFI1Q9UJM3 462 aaPredicted RBP16.02■□□□□ 0.16
CROCCP3-202ENST00000420820 GVINP1Q7Z2Y8 2422 aa16.02■□□□□ 0.15
CROCCP3-202ENST00000420820 PROB1E7EW31 1015 aa16.02■□□□□ 0.15
CROCCP3-202ENST00000420820 AGFG2O95081 481 aa16.02■□□□□ 0.15
CROCCP3-202ENST00000420820 EWSR1Q01844 656 aaKnown RBP eCLIP16.02■□□□□ 0.15
CROCCP3-202ENST00000420820 OR8G5Q8NG78 346 aa16.02■□□□□ 0.15
CROCCP3-202ENST00000420820 OR10V1Q8NGI7 309 aa16.02■□□□□ 0.15
CROCCP3-202ENST00000420820 FAM212BQ9NTI7 297 aaPredicted RBP16.02■□□□□ 0.15
CROCCP3-202ENST00000420820 OR1A1Q9P1Q5 309 aa16.02■□□□□ 0.15
CROCCP3-202ENST00000420820 PURGQ9UJV8 347 aaKnown RBP16.02■□□□□ 0.15
CROCCP3-202ENST00000420820 SH2D1BO14796 132 aa16.01■□□□□ 0.15
CROCCP3-202ENST00000420820 WDR1O75083 606 aa16.01■□□□□ 0.15
CROCCP3-202ENST00000420820 NXPH2O95156 264 aa16.01■□□□□ 0.15
CROCCP3-202ENST00000420820 CD5P06127 495 aa16.01■□□□□ 0.15
CROCCP3-202ENST00000420820 DANCRP0C864 163 aa16.01■□□□□ 0.15
CROCCP3-202ENST00000420820 MMP9P14780 707 aa16.01■□□□□ 0.15
CROCCP3-202ENST00000420820 MUC1P15941 1255 aaPredicted RBP16.01■□□□□ 0.15
CROCCP3-202ENST00000420820 KITLGP21583 273 aa16.01■□□□□ 0.15
CROCCP3-202ENST00000420820 LMO1P25800 156 aa16.01■□□□□ 0.15
CROCCP3-202ENST00000420820 F2RL1P55085 397 aa16.01■□□□□ 0.15
CROCCP3-202ENST00000420820 POLR2GP62487 172 aaKnown RBP eCLIP16.01■□□□□ 0.15
CROCCP3-202ENST00000420820 HMGN3Q15651 99 aa16.01■□□□□ 0.15
CROCCP3-202ENST00000420820 CXorf66Q5JRM2 361 aaPredicted RBP16.01■□□□□ 0.15
CROCCP3-202ENST00000420820 SPAG16Q8N0X2 631 aa16.01■□□□□ 0.15
CROCCP3-202ENST00000420820 TLNRD1Q9H1K6 362 aa16.01■□□□□ 0.15
CROCCP3-202ENST00000420820 TSPAN4O14817 238 aa16■□□□□ 0.15
CROCCP3-202ENST00000420820 PITX3O75364 302 aa16■□□□□ 0.15
CROCCP3-202ENST00000420820 SLC25A6P12236 298 aa16■□□□□ 0.15
CROCCP3-202ENST00000420820 IGFL3Q6UXB1 125 aa16■□□□□ 0.15
CROCCP3-202ENST00000420820 Q6ZRG5 221 aa16■□□□□ 0.15
CROCCP3-202ENST00000420820 PUSL1Q8N0Z8 303 aaKnown RBP16■□□□□ 0.15
CROCCP3-202ENST00000420820 SVBPQ8N300 66 aa16■□□□□ 0.15
CROCCP3-202ENST00000420820 STARD4Q96DR4 205 aa16■□□□□ 0.15
CROCCP3-202ENST00000420820 TSNAXQ99598 290 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms