RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 HLA-DRB3P79483 266 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 AESQ08117 197 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 SURF2Q15527 256 aaPredicted RBP11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 PLET1Q6UQ28 207 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 BTN2A1Q7KYR7 527 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 SPICQ8N5J4 248 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 DEFB108BQ8NET1 73 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 TERB2Q8NHR7 220 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 CCL13Q99616 98 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 SLC6A7Q99884 636 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 TINAGL1Q9GZM7 467 aaPredicted RBP11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 ALX4Q9H161 411 aaPredicted RBP11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 RAB9BQ9NP90 201 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 MIOXQ9UGB7 285 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 TRAPPC2LQ9UL33 140 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 CELSR1Q9NYQ6 3014 aa11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 TRBV6-7A0A0A0MS04 114 aa11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 ODAMA1E959 279 aa11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 F5H0A9 414 aaPredicted RBP11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 OR5H8P0DN80 308 aa11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 ARPC4P59998 168 aa11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 HTD2P86397 168 aa11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 ATXN7L3Q14CW9 347 aaPredicted RBP11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 LRRC10Q5BKY1 277 aa11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 LY6G6FQ5SQ64 297 aa11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 ZNF782Q6ZMW2 699 aaPredicted RBP11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 ZNF841Q6ZN19 808 aa11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 ZDHHC22Q8N966 263 aa11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 OR10A7Q8NGE5 316 aa11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 OR51S1Q8NGJ8 323 aa11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 OR56B4Q8NH76 319 aa11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 NINJ1Q92982 152 aa11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 TAS2R3Q9NYW6 316 aa11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 SLC25A10Q9UBX3 287 aaPredicted RBP11.84□□□□□ -0.51
SHMT1P1-201ENST00000419974 TRBV23-1A0A0A0MS06 115 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 LINC00854A0A1B0GVQ3 168 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 C15orf65H3BRN8 121 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 M0QYG6 137 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 NDUFB3O43676 98 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 TUSC2O75896 110 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 IGHV4-39P01824 125 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 PMP2P02689 132 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 AMY2AP04746 511 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 HEXAP06865 529 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 WNT2P09544 360 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 GSTT2P0CG29 244 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 RCC1P18754 421 aaPredicted RBP11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 GLIPR1P48060 266 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 UCP3P55916 312 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 DSCR9P59020 149 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 LRRC75A-AS1Q8N1F1 130 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 FAM216BQ8N7L0 139 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 OR13C8Q8NGS7 320 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 OR6F1Q8NGZ6 308 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 C8orf46Q8TAG6 207 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 SCGB3A2Q96PL1 93 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 MCUBQ9NWR8 336 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 KCNIP1Q9NZI2 227 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 KIF25Q9UIL4 384 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 UBE2J1Q9Y385 318 aaPredicted RBP11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 LINC00312Q9Y6C7 94 aa11.83□□□□□ -0.52
SHMT1P1-201ENST00000419974 F8P00451 2351 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 HIVEP1P15822 2718 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 TEP1Q99973 2627 aaKnown RBP11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 MEIKINA0A087WXM9 373 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 IGKV1-6A0A0C4DH72 117 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 hADV38S2A0JD32 116 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 LYNX1G3V0Z9 82 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 ADAM20O43506 726 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 SSX4O60224 188 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 ZNF205O95201 554 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 SCTP09683 121 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 LYNX1P0DP58 116 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 GPR6P46095 362 aaPredicted RBP11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 HERPUD1Q15011 391 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 AADACL3Q5VUY0 350 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 IDO2Q6ZQW0 420 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 NLRC3Q7RTR2 1065 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 MRGPRFQ96AM1 343 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 UPRTQ96BW1 309 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 MBD6Q96DN6 1003 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 PATZ1Q9HBE1 687 aaKnown RBP11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 TAF9BQ9HBM6 251 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 BEX4Q9NWD9 120 aaPredicted RBP11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 EHFQ9NZC4 300 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 CTSZQ9UBR2 303 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 ITGB1BP2Q9UKP3 347 aa11.82□□□□□ -0.52
SHMT1P1-201ENST00000419974 ZNF729A6NN14 1252 aaPredicted RBP11.81□□□□□ -0.52
SHMT1P1-201ENST00000419974 C12orf77C9JDV5 145 aa11.81□□□□□ -0.52
SHMT1P1-201ENST00000419974 F2RL2O00254 374 aa11.81□□□□□ -0.52
SHMT1P1-201ENST00000419974 DVL1O14640 695 aa11.81□□□□□ -0.52
SHMT1P1-201ENST00000419974 ITGB1BP1O14713 200 aa11.81□□□□□ -0.52
SHMT1P1-201ENST00000419974 PPIHO43447 177 aaKnown RBP11.81□□□□□ -0.52
SHMT1P1-201ENST00000419974 FCN3O75636 299 aa11.81□□□□□ -0.52
SHMT1P1-201ENST00000419974 SPNP16150 400 aa11.81□□□□□ -0.52
SHMT1P1-201ENST00000419974 RBMXP38159 391 aaKnown RBP11.81□□□□□ -0.52
SHMT1P1-201ENST00000419974 GLP1RP43220 463 aa11.81□□□□□ -0.52
SHMT1P1-201ENST00000419974 PDLIM4P50479 330 aa11.81□□□□□ -0.52
SHMT1P1-201ENST00000419974 CCR6P51684 374 aa11.81□□□□□ -0.52
SHMT1P1-201ENST00000419974 TSPAN5P62079 268 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms